RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 TRPC4Q9UBN4 977 aa14.8□□□□□ -0.04
ACTB-202ENST00000414620 FBXO5Q9UKT4 447 aa14.8□□□□□ -0.04
ACTB-202ENST00000414620 NOVA2Q9UNW9 492 aaKnown RBP14.8□□□□□ -0.04
ACTB-202ENST00000414620 DHRS7Q9Y394 339 aa14.8□□□□□ -0.04
ACTB-202ENST00000414620 PCDHGA10Q9Y5H3 936 aa14.8□□□□□ -0.04
ACTB-202ENST00000414620 GOLGA6L10A0A0M3HER8 536 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 E7ENX8 843 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 ENO3P13929 434 aaPredicted RBP14.79□□□□□ -0.04
ACTB-202ENST00000414620 ACPPP15309 386 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 VARSP26640 1264 aaKnown RBP14.79□□□□□ -0.04
ACTB-202ENST00000414620 IMPA1P29218 277 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 HSD17B2P37059 387 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 CARSP49589 748 aaKnown RBP14.79□□□□□ -0.04
ACTB-202ENST00000414620 TAP2Q03519 686 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 HIVEP3Q5T1R4 2406 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 RNASEH2BQ5TBB1 312 aaKnown RBP14.79□□□□□ -0.04
ACTB-202ENST00000414620 CYHR1Q6ZMK1 362 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 LINC00696Q6ZRV3 163 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 PPIL6Q8IXY8 311 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 CALML6Q8TD86 181 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 PPP4R1Q8TF05 950 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 ASB11Q8WXH4 323 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 NACC2Q96BF6 587 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 MMABQ96EY8 250 aaPredicted RBP14.79□□□□□ -0.04
ACTB-202ENST00000414620 OR2A5Q96R48 311 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 FAM167BQ9BTA0 163 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 ASIC3Q9UHC3 531 aa14.79□□□□□ -0.04
ACTB-202ENST00000414620 COPG1Q9Y678 874 aaKnown RBP14.79□□□□□ -0.04
ACTB-202ENST00000414620 ZGRF1Q86YA3 2104 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 A0A0A6YYC8 382 aaPredicted RBP14.78□□□□□ -0.04
ACTB-202ENST00000414620 I3L1I5 382 aaPredicted RBP14.78□□□□□ -0.04
ACTB-202ENST00000414620 ZBTB14O43829 449 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 HPP00738 406 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 ANXA5P08758 320 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 EZRP15311 586 aaKnown RBP14.78□□□□□ -0.04
ACTB-202ENST00000414620 FNTAP49354 379 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 TBPL1P62380 186 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 SNRPNP63162 240 aaKnown RBP14.78□□□□□ -0.04
ACTB-202ENST00000414620 MAT1AQ00266 395 aaKnown RBP14.78□□□□□ -0.04
ACTB-202ENST00000414620 DHX9Q08211 1270 aaKnown RBP14.78□□□□□ -0.04
ACTB-202ENST00000414620 CRYMQ14894 314 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 MBOAT1Q6ZNC8 495 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 LRRC56Q8IYG6 542 aaPredicted RBP14.78□□□□□ -0.04
ACTB-202ENST00000414620 AMER2Q8N7J2 671 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 AMER3Q8N944 861 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 FBXO15Q8NCQ5 510 aaPredicted RBP14.78□□□□□ -0.04
ACTB-202ENST00000414620 DNAJB14Q8TBM8 379 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 ACTRT1Q8TDG2 376 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 ALKBH8Q96BT7 664 aaKnown RBP14.78□□□□□ -0.04
ACTB-202ENST00000414620 VPS50Q96JG6 964 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 DDX47Q9H0S4 455 aaKnown RBP14.78□□□□□ -0.04
ACTB-202ENST00000414620 EPS8L2Q9H6S3 715 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 TRMT1Q9NXH9 659 aaKnown RBP14.78□□□□□ -0.04
ACTB-202ENST00000414620 UTP6Q9NYH9 597 aaKnown RBP14.78□□□□□ -0.04
ACTB-202ENST00000414620 SLC17A6Q9P2U8 582 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 PLEKHB1Q9UF11 243 aaPredicted RBP14.78□□□□□ -0.04
ACTB-202ENST00000414620 TRMT6Q9UJA5 497 aaKnown RBP14.78□□□□□ -0.04
ACTB-202ENST00000414620 ADAMTS6Q9UKP5 1117 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 CDC14AQ9UNH5 594 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 MRPS2Q9Y399 296 aaKnown RBP14.78□□□□□ -0.04
ACTB-202ENST00000414620 COMMD10Q9Y6G5 202 aa14.78□□□□□ -0.04
ACTB-202ENST00000414620 IGLV3-12A0A075B6K2 115 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 NSG1A0A0A6YYJ2 146 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 IDSB3KWA1 339 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 H7BY64 318 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 GFYI3L273 518 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 DNALI1O14645 258 aaPredicted RBP14.77□□□□□ -0.05
ACTB-202ENST00000414620 PRPF4O43172 522 aaKnown RBP eCLIP14.77□□□□□ -0.052e-11■■■□□ 17.4
ACTB-202ENST00000414620 FOXS1O43638 330 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 KLHL18O94889 574 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 CBX6O95503 412 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 CELA2AP08217 269 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 COX6A1P12074 109 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 PGAM1P18669 254 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 SKIV2L2P42285 1042 aaKnown RBP14.77□□□□□ -0.05
ACTB-202ENST00000414620 EMP2P54851 167 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 ABATP80404 500 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 DSG2Q14126 1118 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 CRB2Q5IJ48 1285 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 RBM20Q5T481 1227 aaKnown RBP14.77□□□□□ -0.05
ACTB-202ENST00000414620 LMNTD2Q8IXW0 634 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 PRAP1Q96NZ9 151 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 DRC3Q9H069 523 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 CCDC177Q9NQR7 707 aaPredicted RBP14.77□□□□□ -0.05
ACTB-202ENST00000414620 KLHL42Q9P2K6 505 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 ERRFI1Q9UJM3 462 aaPredicted RBP14.77□□□□□ -0.05
ACTB-202ENST00000414620 SNX12Q9UMY4 172 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 SH2B3Q9UQQ2 575 aa14.77□□□□□ -0.05
ACTB-202ENST00000414620 CROCCQ5TZA2 2017 aa14.76□□□□□ -0.05
ACTB-202ENST00000414620 CNTRLQ7Z7A1 2325 aa14.76□□□□□ -0.05
ACTB-202ENST00000414620 USP9XQ93008 2570 aaPredicted RBP14.76□□□□□ -0.05
ACTB-202ENST00000414620 ANKUB1A6NFN9 424 aa14.76□□□□□ -0.05
ACTB-202ENST00000414620 HEXBP07686 556 aa14.76□□□□□ -0.05
ACTB-202ENST00000414620 UQCRHP07919 91 aa14.76□□□□□ -0.05
ACTB-202ENST00000414620 SLC26A3P40879 764 aa14.76□□□□□ -0.05
ACTB-202ENST00000414620 EMP3P54852 163 aa14.76□□□□□ -0.05
ACTB-202ENST00000414620 TIAL1Q01085 375 aaKnown RBP eCLIP14.76□□□□□ -0.05
ACTB-202ENST00000414620 CDC16Q13042 620 aa14.76□□□□□ -0.05
ACTB-202ENST00000414620 PTK6Q13882 451 aa14.76□□□□□ -0.05
ACTB-202ENST00000414620 ELOAQ14241 798 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms