RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 NR1D1P20393 614 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 LHCGRP22888 699 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 DGKAP23743 735 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 SFTPDP35247 375 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 CHRNA7P36544 502 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 CETN2P41208 172 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 IER3P46695 156 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 SMSP52788 366 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 GCNT1Q02742 428 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 GFPT1Q06210 699 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 DMP1Q13316 513 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 HERC3Q15034 1050 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 XKR3Q5GH77 459 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 SLC35D3Q5M8T2 416 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 FUT10Q6P4F1 479 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 TOM1L2Q6ZVM7 507 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 ZNF619Q8N2I2 560 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 RTL3Q8N8U3 475 aaKnown RBP4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 POC1AQ8NBT0 407 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 SLC24A4Q8NFF2 622 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 OR52N5Q8NH56 324 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 TMEM143Q96AN5 459 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 ZBTB9Q96C00 473 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 ST6GAL2Q96JF0 529 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 ZNF354BQ96LW1 612 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 C17orf62Q9BQA9 187 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 PI4K2AQ9BTU6 479 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 TRMT61BQ9BVS5 477 aaKnown RBP4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 P2RY12Q9H244 342 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 TNMDQ9H2S6 317 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 DNAJC11Q9NVH1 559 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 NOCTQ9UK39 431 aaKnown RBP4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 KLK4Q9Y5K2 254 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 R4GN57 208 aa4.38□□□□□ -1.71
HMGB3P31-201ENST00000413333 IGLV9-49A0A0B4J1Y8 123 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 E5RGE8 158 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 SMAD6O43541 496 aaKnown RBP4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 BCAS2O75934 225 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 ATP1A1P05023 1023 aaKnown RBP4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 T-ENOLP0DO92 83 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 EFNA1P20827 205 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 NR2C2P49116 596 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 SLC12A3P55017 1021 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 UCP2P55851 309 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 MAZP56270 477 aaKnown RBP4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 BPIFB3P59826 476 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 ZXDBP98169 803 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 ABRQ12979 859 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 PPA1Q15181 289 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 TAF13Q15543 124 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 PM20D1Q6GTS8 502 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 IL17RELQ6ZVW7 336 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 RABEPKQ7Z6M1 372 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 ZNF575Q86XF7 245 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 SERPINA12Q8IW75 414 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 KLHDC8AQ8IYD2 350 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 ZNF383Q8NA42 475 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 LMO3Q8TAP4 145 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 SCRN2Q96FV2 425 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 RUNDC3BQ96NL0 473 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 MAP3K3Q99759 626 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 TRIM7Q9C029 511 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 OR2B2Q9GZK3 357 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 HIPK2Q9H2X6 1198 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 BICC1Q9H694 974 aaKnown RBP4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 DDX31Q9H8H2 851 aaKnown RBP4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 CHST11Q9NPF2 352 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 CD93Q9NPY3 652 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 COMMD8Q9NX08 183 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 CYP39A1Q9NYL5 469 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 TMOD3Q9NYL9 352 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 TAAR2Q9P1P5 351 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 NSG2Q9Y328 171 aa4.37□□□□□ -1.71
HMGB3P31-201ENST00000413333 MYH14Q7Z406 1995 aaKnown RBP4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 TRAV18A0A075B6X5 111 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 KRT87PA6NCN2 255 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 H0YIG0 161 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 REC8O95072 547 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 CAVIN2O95810 425 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 BAG3O95817 575 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 APOHP02749 345 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 F3P13726 295 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 CPA3P15088 417 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 GAP43P17677 238 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 ALDH4A1P30038 563 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 GAS1P54826 345 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 ARHGAP1Q07960 439 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 CETN1Q12798 172 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 SMC1AQ14683 1233 aaKnown RBP4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 OPCMLQ14982 345 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 C20orf194Q5TEA3 1177 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 CAPRIN2Q6IMN6 1127 aaKnown RBP4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 KRTAP5-3Q6L8H2 238 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 SIGLEC15Q6ZMC9 328 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 EXOC3L1Q86VI1 746 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 NAGSQ8N159 534 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 ZNF843Q8N446 348 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 CLEC1AQ8NC01 280 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 OR13C3Q8NGS6 347 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 RNASE8Q8TDE3 154 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms