RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 OIT3Q8WWZ8 545 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 METTL21AQ8WXB1 218 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 WASF1Q92558 559 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 FCGR1BQ92637 280 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 RHBDF1Q96CC6 855 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 MAGED4Q96JG8 741 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 CNOT6LQ96LI5 555 aaKnown RBP4.27□□□□□ -1.73
BRCA1-204ENST00000412061 RASL10BQ96S79 203 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 PCYT2Q99447 389 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 PIGQQ9BRB3 760 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 SLC2A11Q9BYW1 496 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 SIRPDQ9H106 197 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 Q9N2K0 584 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 TRPV5Q9NQA5 729 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 PANK4Q9NVE7 773 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 DONSONQ9NYP3 566 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 MGAT4BQ9UQ53 548 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 ENTPD4Q9Y227 616 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.27□□□□□ -1.73
BRCA1-204ENST00000412061 TTC21BQ7Z4L5 1316 aa4.27□□□□□ -1.73
BRCA1-204ENST00000412061 A0A087X0K7 114 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 A0A1W2PPK0 400 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 LRRIQ4A6NIV6 560 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 PRSS46E5RG02 174 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 PSMD3O43242 534 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 LDB2O43679 373 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 LANCL1O43813 399 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 MOCS2O96007 188 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-204ENST00000412061 CYP1A2P05177 515 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 MMP10P09238 476 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 STAG3L1P0CL83 205 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 SMIM18P0DKX4 95 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 CLUP10909 449 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 EPCAMP16422 314 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 UGT1A1P22309 533 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 ABCG1P45844 678 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 OR3A1P47881 315 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 FMO5P49326 533 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 RAD23BP54727 409 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 GAGE2BQ13066 116 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 LAMB3Q13751 1172 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 GK2Q14410 553 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-204ENST00000412061 PPP1R7Q15435 360 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 PRTGQ2VWP7 1150 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 ZNF284Q2VY69 593 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 SLC36A3Q495N2 470 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 GAGE2EQ4V326 116 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 CAVIN4Q5BKX8 364 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 XKR9Q5GH70 373 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 GAGE2AQ6NT46 116 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 ANGPTL8Q6UXH0 198 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 ZNF517Q6ZMY9 492 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-204ENST00000412061 ARHGAP22Q7Z5H3 698 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 AMIGO1Q86WK6 493 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 FAM114A1Q8IWE2 563 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 FAM71CQ8NEG0 241 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 OR6C4Q8NGE1 309 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 OR4A16Q8NH70 328 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 AGR3Q8TD06 166 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 GANCQ8TET4 914 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 PROX1Q92786 737 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 COG3Q96JB2 828 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 APOLD1Q96LR9 279 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 ZBTB18Q99592 522 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 COQ7Q99807 217 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 HAUS8Q9BT25 410 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 LMF2Q9BU23 707 aaKnown RBP4.26□□□□□ -1.73
BRCA1-204ENST00000412061 SEMA6AQ9H2E6 1030 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 CHMP4BQ9H444 224 aaKnown RBP4.26□□□□□ -1.73
BRCA1-204ENST00000412061 TMEM231Q9H6L2 316 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 ROPN1Q9HAT0 212 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-204ENST00000412061 VAT1LQ9HCJ6 419 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 TMEM51Q9NW97 253 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 NPAP1Q9NZP6 1156 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 RCC2Q9P258 522 aaKnown RBP4.26□□□□□ -1.73
BRCA1-204ENST00000412061 GAGE2DQ9UEU5 116 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 CHRNA9Q9UGM1 479 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 PCSK1NQ9UHG2 260 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 BAIAP2L1Q9UHR4 511 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 SH3GLB1Q9Y371 365 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 NME7Q9Y5B8 376 aa4.26□□□□□ -1.73
BRCA1-204ENST00000412061 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 ARPC4-TTLL3A0A0A6YYG9 625 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 A0A0U1RRA0 63 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 MAGEB16A2A368 324 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 FAM90A26D6RGX4 464 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 SLC28A1O00337 649 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 ANKRD28O15084 1053 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 MAPK13O15264 365 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 KCNN4O15554 427 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 ITM2AO43736 263 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 SURF6O75683 361 aaKnown RBP4.25□□□□□ -1.73
BRCA1-204ENST00000412061 DDNO94850 711 aaPredicted RBP4.25□□□□□ -1.73
BRCA1-204ENST00000412061 OR6A2O95222 327 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 CH25HO95992 272 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 GAS8O95995 478 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 FGF2P09038 288 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 ATP6V1C1P21283 382 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 DRD5P21918 477 aa4.25□□□□□ -1.73
BRCA1-204ENST00000412061 FBLP22087 321 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms