RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 FBXO42Q6P3S6 717 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 TMPRSS11BQ86T26 416 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 DTX1Q86Y01 620 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 GPR135Q8IZ08 494 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 OR4N4Q8N0Y3 316 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 RIBC1Q8N443 379 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-206ENST00000412056 ZNF655Q8N720 491 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-206ENST00000412056 GALNT6Q8NCL4 622 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 UBTD2Q8WUN7 234 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 NEIL2Q969S2 332 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 SELENOSQ9BQE4 189 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 SPNS1Q9H2V7 528 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 DNAJC11Q9NVH1 559 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 IRAK4Q9NWZ3 460 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 TMEM216Q9P0N5 145 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 DYRK1BQ9Y463 629 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 CHD8Q9HCK8 2581 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 ACACBO00763 2458 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 FEZF1A0PJY2 475 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 CCDC151A5D8V7 595 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 LRRC14BA6NHZ5 514 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 ZSCAN9O15535 394 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-206ENST00000412056 ZNF749O43361 778 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 KLK8O60259 260 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 CCNT2O60583 730 aaKnown RBP13.35□□□□□ -0.27
CPNE1-206ENST00000412056 CPNE3O75131 537 aaKnown RBP13.35□□□□□ -0.27
CPNE1-206ENST00000412056 STK16O75716 305 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 SBK3P0C264 359 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 GFAPP14136 432 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 EZRP15311 586 aaKnown RBP13.35□□□□□ -0.27
CPNE1-206ENST00000412056 HRH2P25021 359 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 GPS2Q13227 327 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 SRSF6Q13247 344 aaKnown RBP13.35□□□□□ -0.27
CPNE1-206ENST00000412056 SETDB1Q15047 1291 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 ST3GAL2Q16842 350 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 PFKFB4Q16877 469 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 C16orf46Q6P387 395 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 SH2D5Q6ZV89 423 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 SPACA3Q8IXA5 215 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 NLGN4XQ8N0W4 816 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 CNPY4Q8N129 248 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 SNX31Q8N9S9 440 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 SLC38A9Q8NBW4 561 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 ABHD11Q8NFV4 315 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 NLGN4YQ8NFZ3 816 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-206ENST00000412056 SLC5A11Q8WWX8 675 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 NKD1Q969G9 470 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 ZNF285Q96NJ3 590 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 MRPL57Q9BQC6 102 aaKnown RBP13.35□□□□□ -0.27
CPNE1-206ENST00000412056 ROPN1BQ9BZX4 212 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-206ENST00000412056 MRPL46Q9H2W6 279 aaKnown RBP13.35□□□□□ -0.27
CPNE1-206ENST00000412056 CNOT10Q9H9A5 744 aaKnown RBP13.35□□□□□ -0.27
CPNE1-206ENST00000412056 ACTR5Q9H9F9 607 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-206ENST00000412056 ROPN1Q9HAT0 212 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-206ENST00000412056 STARD5Q9NSY2 213 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 WDR70Q9NW82 654 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 LGALS13Q9UHV8 139 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 PCDHB3Q9Y5E6 796 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 KCNE2Q9Y6J6 123 aa13.35□□□□□ -0.27
CPNE1-206ENST00000412056 H0YGG7 62 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 KLK10O43240 276 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 ERLIN1O75477 346 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 STATHP02808 62 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 EIF2S1P05198 315 aaKnown RBP13.34□□□□□ -0.27
CPNE1-206ENST00000412056 BCL6P41182 706 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 GCGRP47871 477 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 CCR8P51685 355 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 ALDH18A1P54886 795 aaKnown RBP13.34□□□□□ -0.27
CPNE1-206ENST00000412056 ARF3P61204 181 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-206ENST00000412056 REEP5Q00765 189 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 ZNF844Q08AG5 666 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 CDC16Q13042 620 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 MAP7Q14244 749 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 WASHC2DQ5SRD0 308 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 TLDC1Q6P9B6 456 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 C6orf15Q6UXA7 325 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-206ENST00000412056 LRRC70Q7Z2Q7 622 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 VASH2Q86V25 355 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 CACNA2D3Q8IZS8 1091 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 TMEM151AQ8N4L1 468 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 PTGR2Q8N8N7 351 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-206ENST00000412056 CLIP3Q96DZ5 547 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 OR2A5Q96R48 311 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 TMEM109Q9BVC6 243 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 CD244Q9BZW8 370 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 SLC7A5P2Q9GIP4 190 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 PELI2Q9HAT8 420 aa13.34□□□□□ -0.27
CPNE1-206ENST00000412056 SRRM3A6NNA2 597 aaPredicted RBP13.33□□□□□ -0.28
CPNE1-206ENST00000412056 P2RX6O15547 441 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 RRP8O43159 456 aaKnown RBP13.33□□□□□ -0.28
CPNE1-206ENST00000412056 CTIFO43310 598 aaKnown RBP13.33□□□□□ -0.28
CPNE1-206ENST00000412056 LCMT2O60294 686 aaKnown RBP13.33□□□□□ -0.28
CPNE1-206ENST00000412056 SRPX2O60687 465 aaPredicted RBP13.33□□□□□ -0.28
CPNE1-206ENST00000412056 PRAMEF4O60810 478 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 GLRA3O75311 464 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 GSTA1P08263 222 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 EPORP19235 508 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 VARSP26640 1264 aaKnown RBP13.33□□□□□ -0.28
CPNE1-206ENST00000412056 ITPKBP27987 946 aa13.33□□□□□ -0.28
CPNE1-206ENST00000412056 RORAP35398 523 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms