RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 LRRC8EQ6NSJ5 796 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 ZDHHC24Q6UX98 284 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 ZNF572Q7Z3I7 529 aaPredicted RBP18.17■□□□□ 0.5
SF3A1-202ENST00000411423 RAB43Q86YS6 212 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 CEP97Q8IW35 865 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 CSNK1A1LQ8N752 337 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 GABPB2Q8TAK5 448 aaPredicted RBP18.17■□□□□ 0.5
SF3A1-202ENST00000411423 MCOLN3Q8TDD5 553 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 PTERQ96BW5 349 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 SGPP1Q9BX95 441 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 SAYSD1Q9NPB0 183 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 CCDC177Q9NQR7 707 aaPredicted RBP18.17■□□□□ 0.5
SF3A1-202ENST00000411423 ANAPC2Q9UJX6 822 aa18.17■□□□□ 0.5
SF3A1-202ENST00000411423 MRPS2Q9Y399 296 aaKnown RBP18.17■□□□□ 0.5
SF3A1-202ENST00000411423 PCDHGA9Q9Y5G4 932 aaKnown RBP18.17■□□□□ 0.5
SF3A1-202ENST00000411423 SPTA1P02549 2419 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 FAM95CA0A1B0GW59 222 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 SOCS6O14544 535 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 FOXS1O43638 330 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 CCNDBP1O95273 360 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 ALBP02768 609 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 SAT1P21673 171 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 TAS2R39P59534 338 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 IL2P60568 153 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 CSNK1G2P78368 415 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 KLRB1Q12918 225 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 NAE1Q13564 534 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 FAM214AQ32MH5 1076 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 SBSNQ6UWP8 590 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 MED25Q71SY5 747 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 MAATS1Q7Z4T9 603 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 VN1R4Q7Z5H5 301 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 ADCK2Q7Z695 626 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 TMEM102Q8N9M5 508 aaPredicted RBP18.16■□□□□ 0.5
SF3A1-202ENST00000411423 BBOF1Q8ND07 529 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 ANKRD49Q8WVL7 239 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 PYCR2Q96C36 320 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 OR4K3Q96R72 315 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 MACROD1Q9BQ69 325 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 P4HTMQ9NXG6 502 aa18.16■□□□□ 0.5
SF3A1-202ENST00000411423 ANKRD12Q6UB98 2062 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 CDC7O00311 574 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 WISP1O95388 367 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 EZRP15311 586 aaKnown RBP18.15■□□□□ 0.5
SF3A1-202ENST00000411423 ZNF37AP17032 561 aaPredicted RBP18.15■□□□□ 0.5
SF3A1-202ENST00000411423 EFNA3P52797 238 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 NAA25Q14CX7 972 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 IGFBP7Q16270 282 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 PPP1R3AQ16821 1122 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 NADK2Q4G0N4 442 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 DCAF10Q5QP82 559 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 SLC26A11Q86WA9 606 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 FBXO25Q8TCJ0 367 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 ALKBH8Q96BT7 664 aaKnown RBP18.15■□□□□ 0.5
SF3A1-202ENST00000411423 CABS1Q96KC9 395 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 WDR54Q9H977 334 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 ZNF304Q9HCX3 659 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 HS3ST3B1Q9Y662 390 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 RELNP78509 3460 aa18.15■□□□□ 0.5
SF3A1-202ENST00000411423 NUP210LQ5VU65 1888 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 FEZF1A0PJY2 475 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 LCMT2O60294 686 aaKnown RBP18.14■□□□□ 0.49
SF3A1-202ENST00000411423 WISP3O95389 354 aaPredicted RBP18.14■□□□□ 0.49
SF3A1-202ENST00000411423 NPPBP16860 134 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 PGDP52209 483 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 PLTPP55058 493 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 SLC7A5Q01650 507 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 RELAQ04206 551 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 CALCOCO2Q13137 446 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 SYT16Q17RD7 645 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 MUM1Q2TAK8 710 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 VWA2Q5GFL6 755 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 PRSS41Q7RTY9 318 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 LAPTM4BQ86VI4 370 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 PRSS58Q8IYP2 241 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 AMER2Q8N7J2 671 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 AMER3Q8N944 861 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 OR56A3Q8NH54 315 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 STT3BQ8TCJ2 826 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 PYROXD1Q8WU10 500 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 COL26A1Q96A83 441 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 PDLIM5Q96HC4 596 aaKnown RBP18.14■□□□□ 0.49
SF3A1-202ENST00000411423 C16orf45Q96MC5 204 aaPredicted RBP18.14■□□□□ 0.49
SF3A1-202ENST00000411423 CAB39LQ9H9S4 337 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 TMEM184CQ9NVA4 438 aa18.14■□□□□ 0.49
SF3A1-202ENST00000411423 UTP6Q9NYH9 597 aaKnown RBP18.14■□□□□ 0.49
SF3A1-202ENST00000411423 MTO1Q9Y2Z2 717 aaKnown RBP18.14■□□□□ 0.49
SF3A1-202ENST00000411423 TCRBV9S1A1TA0A576 114 aa18.13■□□□□ 0.49
SF3A1-202ENST00000411423 ESYT3A0FGR9 886 aa18.13■□□□□ 0.49
SF3A1-202ENST00000411423 NPEPPSL1A6NEC2 478 aa18.13■□□□□ 0.49
SF3A1-202ENST00000411423 EIF3HO15372 352 aaKnown RBP eCLIP18.13■□□□□ 0.49
SF3A1-202ENST00000411423 GUCA1CO95843 209 aa18.13■□□□□ 0.49
SF3A1-202ENST00000411423 CD63P08962 238 aa18.13■□□□□ 0.49
SF3A1-202ENST00000411423 PIM1P11309 404 aaPredicted RBP18.13■□□□□ 0.49
SF3A1-202ENST00000411423 CDH1P12830 882 aa18.13■□□□□ 0.49
SF3A1-202ENST00000411423 MMP11P24347 488 aa18.13■□□□□ 0.49
SF3A1-202ENST00000411423 GMPRP36959 345 aa18.13■□□□□ 0.49
SF3A1-202ENST00000411423 BCL6P41182 706 aa18.13■□□□□ 0.49
SF3A1-202ENST00000411423 EMP3P54852 163 aa18.13■□□□□ 0.49
SF3A1-202ENST00000411423 KLC1Q07866 573 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms