RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 HSPA12AO43301 675 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 VPS26AO75436 327 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 MFN2O95140 757 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 CH25HO95992 272 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 SP9P0CG40 484 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 SMIM18P0DKX4 95 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 RALAP11233 206 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 IRF2P14316 349 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 CHRNB2P17787 502 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 DRD5P21918 477 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 STX2P32856 288 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 SOX10P56693 466 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 CCZ1BP86790 482 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 CCZ1P86791 482 aaPredicted RBP4.63□□□□□ -1.67
LSM5-205ENST00000409952 CRYZQ08257 329 aaKnown RBP4.63□□□□□ -1.67
LSM5-205ENST00000409952 IDI1Q13907 227 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 ZNF169Q14929 603 aaPredicted RBP4.63□□□□□ -1.67
LSM5-205ENST00000409952 CARTPTQ16568 116 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 USH1GQ495M9 461 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 RAB6CQ53S08 254 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 CAVIN4Q5BKX8 364 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 PIK3CD-AS1Q5SR53 167 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 ZNF770Q6IQ21 691 aaPredicted RBP4.63□□□□□ -1.67
LSM5-205ENST00000409952 C11orf63Q6NUN7 778 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 RGMBQ6NW40 437 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 LRRC70Q7Z2Q7 622 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 COMMD2Q86X83 199 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 ZDHHC21Q8IVQ6 265 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 BCORP1Q8N888 145 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 THAP8Q8NA92 274 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 C8orf58Q8NAV2 365 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 ACVR1CQ8NER5 493 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 OR2AK2Q8NG84 335 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 OR14A16Q8NHC5 309 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 THAP6Q8TBB0 222 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 GANCQ8TET4 914 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 GIMAP1Q8WWP7 306 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 ZG16BQ96DA0 208 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 GIMAP5Q96F15 307 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 COG3Q96JB2 828 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 TSSK2Q96PF2 358 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 PCYT2Q99447 389 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 WDR77Q9BQA1 342 aaPredicted RBP4.63□□□□□ -1.67
LSM5-205ENST00000409952 KXD1Q9BQD3 176 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 CCDC77Q9BR77 488 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 SPRY4Q9C004 299 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 RAB6CQ9H0N0 254 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 ZDHHC6Q9H6R6 413 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 Q9H8V8 135 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 THSD1Q9NS62 852 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 TMEM184CQ9NVA4 438 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 B3GAT1Q9P2W7 334 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 PAM16Q9Y3D7 125 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 RAI2Q9Y5P3 530 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 TTC21BQ7Z4L5 1316 aa4.63□□□□□ -1.67
LSM5-205ENST00000409952 FNDC1Q4ZHG4 1894 aaPredicted RBP4.62□□□□□ -1.67
LSM5-205ENST00000409952 TRBV5-3A0A0A0MS03 114 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 A0A1B0GUL7 405 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 GOLGA6L9A6NEM1 432 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 ERICH4A6NGS2 130 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 H0Y8G0 127 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 XPO1O14980 1071 aaKnown RBP4.62□□□□□ -1.67
LSM5-205ENST00000409952 GPR137BO60478 399 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 CSO75390 466 aaKnown RBP4.62□□□□□ -1.67
LSM5-205ENST00000409952 CSDE1O75534 798 aaKnown RBP4.62□□□□□ -1.67
LSM5-205ENST00000409952 TOM1L1O75674 476 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 WDPCPO95876 746 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 LDLRP01130 860 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 CLUP10909 449 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 TNNI3P19429 210 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 FBLP22087 321 aaKnown RBP4.62□□□□□ -1.67
LSM5-205ENST00000409952 CALB2P22676 271 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 HLA-FP30511 346 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 ARRB2P32121 409 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 ROR2Q01974 943 aaKnown RBP4.62□□□□□ -1.67
LSM5-205ENST00000409952 CTF1Q16619 201 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 PDK4Q16654 411 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 TPD52L1Q16890 204 aaPredicted RBP4.62□□□□□ -1.67
LSM5-205ENST00000409952 SMTNL2Q2TAL5 461 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 SLC9C1Q4G0N8 1177 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 CFAP221Q4G0U5 840 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 ASPHD1Q5U4P2 390 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 Q75L30 129 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 ANKRD33Q7Z3H0 272 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 GPR141Q7Z602 305 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 ZNF575Q86XF7 245 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 ADGRG3Q86Y34 549 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 GPSM1Q86YR5 675 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 THEM5Q8N1Q8 247 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 PPFIBP2Q8ND30 876 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 OR2T3Q8NH03 318 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 SLC44A1Q8WWI5 657 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 METTL21AQ8WXB1 218 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 RND1Q92730 232 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 HAS2Q92819 552 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 CASP10Q92851 521 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 ULK4Q96C45 1275 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 THOC3Q96J01 351 aaKnown RBP4.62□□□□□ -1.67
LSM5-205ENST00000409952 TCEANC2Q96MN5 208 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 PSKH2Q96QS6 385 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms