RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SRRDQ9UH36 339 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 PREX1Q8TCU6 1659 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 SPEF2Q9C093 1822 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 PRAMEF33A0A0G2JMD5 474 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 TOR1BO14657 336 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 PRAMEF10O60809 474 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 GDF5P43026 501 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 CAV3P56539 151 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 FOLH1Q04609 750 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 PCBP1Q15365 356 aaKnown RBP eCLIP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 FKBP1CQ5VVH2 108 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 POTEHQ6S545 545 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 RBM44Q6ZP01 1051 aaKnown RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 ASB18Q6ZVZ8 466 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 ZNF471Q9BX82 626 aaPredicted RBP8.2□□□□□ -1.1
SCN9A-203ENST00000409672 ZNF350Q9GZX5 532 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 ZNF69Q9UC07 566 aa8.2□□□□□ -1.1
SCN9A-203ENST00000409672 DIRAS1O95057 198 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 CHRNEQ04844 493 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 E2F2Q14209 437 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 CLCA4Q14CN2 919 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 SMAD2Q15796 467 aaKnown RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 SPDYCQ5MJ68 293 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 CCDC116Q8IYX3 515 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 IL4I1Q96RQ9 567 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 RNF39Q9H2S5 420 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 MADDQ8WXG6 1647 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 FAM234BA2RU67 622 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 IGLON5A6NGN9 336 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 E7ENX8 843 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 DHX15O43143 795 aaKnown RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 C2P06681 752 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 MTHFD1P11586 935 aaKnown RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 MAGEA11P43364 429 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 SCARB2Q14108 478 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 RPS27LQ71UM5 84 aaKnown RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 MFSD2AQ8NA29 543 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 OR2L2Q8NH16 312 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 DCAKDQ8WVC6 231 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 PNPLA2Q96AD5 504 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 SLC22A18Q96BI1 424 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 PCBD2Q9H0N5 130 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 STARD5Q9NSY2 213 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 LAMP5Q9UJQ1 280 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 ADAM18Q9Y3Q7 739 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 PRR5-ARHGAP8B1AHC4 643 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 PI15O43692 258 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 SOX14O95416 240 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 PSMG1O95456 288 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 RHOP08100 348 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 SPATA31C1P0DKV0 1188 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 GNAZP19086 355 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 LEPRP48357 1165 aaKnown RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 FKBP1AP62942 108 aaKnown RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 ARHGAP8P85298 464 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 MRPL49Q13405 166 aaKnown RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 PPA1Q15181 289 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 FIGNL1Q6PIW4 674 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 ZNF700Q9H0M5 742 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 SLC2A4RGQ9NR83 387 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 HAO2Q9NYQ3 351 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 AP4B1Q9Y6B7 739 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 SLC30A4O14863 429 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 CCNE2O96020 404 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 C8GP07360 202 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 ATP1B2P14415 290 aaPredicted RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 SFTPDP35247 375 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 RPS13P62277 151 aaKnown RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 MAD2L1BPQ15013 274 aaPredicted RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 PDK3Q15120 406 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 RBM48Q5RL73 367 aaKnown RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 C12orf40Q86WS4 652 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 NFKBIDQ8NI38 313 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 ARHGAP39Q9C0H5 1083 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 PTGES2Q9H7Z7 377 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 HEPACAM2A8MVW5 462 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 PSKH1P11801 424 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 PEPDP12955 493 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 ELOCQ15369 112 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 LTC4SQ16873 150 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 DEFB133Q30KQ1 61 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 CRB2Q5IJ48 1285 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 OR9K2Q8NGE7 335 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 RPLP0P6Q8NHW5 317 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 SPRYD4Q8WW59 207 aaPredicted RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 SLC7A6OSQ96CW6 309 aaPredicted RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 C17orf62Q9BQA9 187 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 AMBNQ9NP70 447 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 BATF3Q9NR55 127 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 DNAJB4Q9UDY4 337 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 NINQ8N4C6 2090 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 UNC5CO95185 931 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 CDH1P12830 882 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 MAOBP27338 520 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 UBE2NP61088 152 aaKnown RBP8.19□□□□□ -1.1
SCN9A-203ENST00000409672 ZACNQ401N2 412 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 SH3D19Q5HYK7 790 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 ZNF311Q5JNZ3 666 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 VTCN1Q7Z7D3 282 aa8.19□□□□□ -1.1
SCN9A-203ENST00000409672 ADGRD2Q7Z7M1 963 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms