RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 GSRP00390 522 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 MYBL1P10243 752 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 GP1BBP13224 206 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 RAB28P51157 221 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 TMEM50BP56557 158 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 NONOQ15233 471 aaKnown RBP eCLIP3.43□□□□□ -1.86
PMS1-203ENST00000409593 CTR9Q6PD62 1173 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 CHMP1BQ7LBR1 199 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 TLK2Q86UE8 772 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 TSACCQ96A04 125 aaPredicted RBP3.43□□□□□ -1.86
PMS1-203ENST00000409593 HDAC11Q96DB2 347 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 B3GAT2Q9NPZ5 323 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 IGSF1Q8N6C5 1336 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 A0A1B0GVY2 172 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 CASTOR2A6NHX0 329 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 MPTX1A8MV57 137 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 CCL24O00175 119 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 OR52Z1P0C646 297 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 RBMS1P29558 406 aaKnown RBP3.43□□□□□ -1.86
PMS1-203ENST00000409593 RBPJQ06330 500 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 RASGEF1BQ0VAM2 473 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 AIMP1Q12904 312 aaKnown RBP3.43□□□□□ -1.86
PMS1-203ENST00000409593 SGCGQ13326 291 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 PTPN14Q15678 1187 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 ZNF239Q16600 458 aaKnown RBP3.43□□□□□ -1.86
PMS1-203ENST00000409593 CRY2Q49AN0 593 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 TCTEX1D4Q5JR98 221 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 ZNF343Q6P1L6 599 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 FRRS1Q6ZNA5 592 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 FCRLAQ7L513 359 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 MFN1Q8IWA4 741 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 LMNTD2Q8IXW0 634 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 MIPOL1Q8TD10 442 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 PIK3R3Q92569 461 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 ZNF558Q96NG5 402 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 AGAP4Q96P64 663 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 GSN-AS1Q9NRJ2 163 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.43□□□□□ -1.86
PMS1-203ENST00000409593 BCCIPQ9P287 314 aaKnown RBP eCLIP3.43□□□□□ -1.86
PMS1-203ENST00000409593 SELENOKQ9Y6D0 94 aa3.43□□□□□ -1.86
PMS1-203ENST00000409593 ADRB2P07550 413 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 CAPN2P17655 700 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 IL11P20809 199 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 ALDH1B1P30837 517 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 SOX3P41225 446 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 OPCMLQ14982 345 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 TOMM20Q15388 145 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 SPINK14Q6IE38 97 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 RBPMS2Q6ZRY4 209 aaKnown RBP3.42□□□□□ -1.86
PMS1-203ENST00000409593 SLC24A5Q71RS6 500 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 ZER1Q7Z7L7 766 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 METTL4Q8N3J2 472 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 ANKRD13CQ8N6S4 541 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 XXYLT1Q8NBI6 393 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 PRSS33Q8NF86 280 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 OR6J1Q8NGC5 347 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 SPSB1Q96BD6 273 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 PGAP3Q96FM1 320 aaPredicted RBP3.42□□□□□ -1.86
PMS1-203ENST00000409593 C2orf48Q96LS8 159 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 SOSTQ9BQB4 213 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 TDRD1Q9BXT4 1180 aaKnown RBP3.42□□□□□ -1.86
PMS1-203ENST00000409593 DNAJC4Q9NNZ3 241 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 NDE1Q9NXR1 346 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 WDR35Q9P2L0 1181 aa3.42□□□□□ -1.86
PMS1-203ENST00000409593 IGHV3OR16-10A0A075B7F0 116 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 TRAV24A0A0B4J272 114 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 SERINC4A6NH21 518 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 ATP6AP2O75787 350 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 KRT33AO76009 404 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 ACHEP22303 614 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 GATA2P23769 480 aaPredicted RBP3.41□□□□□ -1.86
PMS1-203ENST00000409593 ELAVL4P26378 380 aaKnown RBP3.41□□□□□ -1.86
PMS1-203ENST00000409593 PDHA2P29803 388 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 CETN2P41208 172 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 RAD52P43351 418 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 OR3A2P47893 321 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 UBASH3AP57075 661 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 IRX4P78413 519 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 TAB1Q15750 504 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 SPAG16Q8N0X2 631 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 FAM89BQ8N5H3 189 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 OR5T2Q8NGG2 359 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 OR2L2Q8NH16 312 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 C11orf45Q8TAV5 145 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 CNRIP1Q96F85 164 aaPredicted RBP3.41□□□□□ -1.86
PMS1-203ENST00000409593 ATXN7L3BQ96GX2 97 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 HOXD1Q9GZZ0 328 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 PANK3Q9H999 370 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 XAB2Q9HCS7 855 aaKnown RBP3.41□□□□□ -1.86
PMS1-203ENST00000409593 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.41□□□□□ -1.86
PMS1-203ENST00000409593 PA2G4Q9UQ80 394 aaKnown RBP3.41□□□□□ -1.86
PMS1-203ENST00000409593 KAT6BQ8WYB5 2073 aa3.41□□□□□ -1.86
PMS1-203ENST00000409593 COL5A2P05997 1499 aaPredicted RBP3.41□□□□□ -1.86
PMS1-203ENST00000409593 URADA6NGE7 173 aa3.4□□□□□ -1.86
PMS1-203ENST00000409593 ASB14A6NK59 587 aa3.4□□□□□ -1.86
PMS1-203ENST00000409593 EPM2AB3EWF7 344 aa3.4□□□□□ -1.86
PMS1-203ENST00000409593 P4HA2O15460 535 aa3.4□□□□□ -1.86
PMS1-203ENST00000409593 GGPS1O95749 300 aa3.4□□□□□ -1.86
PMS1-203ENST00000409593 BAG3O95817 575 aa3.4□□□□□ -1.86
PMS1-203ENST00000409593 MYL6BP14649 208 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms