RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 LCHNA4D1U4 455 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 TRAPPC6AO75865 159 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 EBLN1P0CF75 366 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 PREPP48147 710 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 VLDLRP98155 873 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 KLF1Q13351 362 aaPredicted RBP24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 USP30Q70CQ3 517 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 C11orf24Q96F05 449 aaPredicted RBP24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 GPR22Q99680 433 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 COMMD3-BMI1R4GMX3 469 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 MYADML2A6NDP7 307 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 ANXA2P2A6NMY6 339 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 ANXA2P07355 339 aaKnown RBP24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 EEFSECP57772 596 aaKnown RBP24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 TAS1R3Q7RTX0 852 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 GPN1Q9HCN4 374 aaPredicted RBP24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 WDR6Q9NNW5 1121 aaKnown RBP24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 PCDHGA2Q9Y5H1 932 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 ZNF487B1APH4 448 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 ANXA8P13928 327 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 BICRALQ6AI39 1079 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 HSD3B7Q9H2F3 369 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 NOX1Q9Y5S8 564 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 RNGTTO60942 597 aaKnown RBP24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 CPNE3O75131 537 aaKnown RBP24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 PAK4O96013 591 aaPredicted RBP24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 NR2C1P13056 603 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 ZNF598Q86UK7 904 aaKnown RBP24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 LYARQ9NX58 379 aaKnown RBP24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 OXTRP30559 389 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 HERC3Q15034 1050 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 MEIOBQ8N635 442 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 PQLC3Q8N755 202 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 MAGEE1Q9HCI5 957 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 KAT7O95251 611 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 C17orf99Q6UX52 265 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 ZSWIM3Q96MP5 696 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 DAPL1A0PJW8 107 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 ZNF840PA6NDX5 716 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 HMGN1P05114 100 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 CDKN1CP49918 316 aaPredicted RBP24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 TRAM1L1Q8N609 369 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 ACTL8Q9H568 366 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 ZDHHC18Q9NUE0 388 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 CA14Q9ULX7 337 aa24.37■■□□□ 1.49
SPIRE1-202ENST00000409402 SOX4Q06945 474 aaPredicted RBP24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 DNM1P34Q6PK57 102 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 SLC2A11Q9BYW1 496 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 BCHEP06276 602 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 F7P08709 466 aaPredicted RBP24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 RPS13P62277 151 aaKnown RBP24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 EIF4HQ15056 248 aaKnown RBP24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 FAM156AQ8NDB6 213 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 MR1Q95460 341 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 KIAA1191Q96A73 305 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 CEP295NLQ96MC4 621 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 GPR174Q9BXC1 333 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 CACNA1FO60840 1977 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 TIMP1P01033 207 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 ZNF3P17036 446 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 FAM214AQ32MH5 1076 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 CRB2Q5IJ48 1285 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 TRIM74Q86UV6 250 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 COQ8BQ96D53 544 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 SLC2A13Q96QE2 648 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 PEBP4Q96S96 227 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 TCF7L1Q9HCS4 588 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 CDH1P12830 882 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 ETV3P41162 512 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 GEMIN6Q8WXD5 167 aaKnown RBP24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 MARK1Q9P0L2 795 aa24.36■■□□□ 1.49
SPIRE1-202ENST00000409402 OR5K4A6NMS3 321 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 HNF1BP35680 557 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 GDF5P43026 501 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 CREB5Q02930 508 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 TMEM214Q6NUQ4 689 aaKnown RBP24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 SETD6Q8TBK2 473 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 KCNJ9Q92806 393 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 PNPLA2Q96AD5 504 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 CLEC3AO75596 197 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 LATS1O95835 1130 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 MC1RQ01726 317 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 ZSCAN1Q8NBB4 408 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 CD244Q9BZW8 370 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 GPR34Q9UPC5 381 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 PDCD5O14737 125 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 KHNYNO15037 678 aaKnown RBP24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 DLX3O60479 287 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 DBIP07108 87 aaKnown RBP24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 STK19P49842 368 aaPredicted RBP24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 PCBP2Q15366 365 aaKnown RBP eCLIP24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 LACTB2Q53H82 288 aaPredicted RBP24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 OR10T2Q8NGX3 314 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 BHLHE41Q9C0J9 482 aaPredicted RBP24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 ADAM7Q9H2U9 754 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 ABCB9Q9NP78 766 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 C2orf78A6NCI8 922 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 ZNF20P17024 532 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 HOXD13P35453 343 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 OR10G2Q8NGC3 310 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms