RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ZNF69Q9UC07 566 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 SLC27A5Q9Y2P5 690 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 WNT9AO14904 365 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 RYKP34925 604 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 RAVER1Q8IY67 606 aaKnown RBP17.2■□□□□ 0.34
SMPD4-202ENST00000409031 CFAP206Q8IYR0 622 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 ADAMTS15Q8TE58 950 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 NPY6RQ99463 290 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 XKR8Q9H6D3 395 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 ABCB8Q9NUT2 735 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 POU2F3Q9UKI9 436 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 SETD1AO15047 1707 aaKnown RBP17.2■□□□□ 0.34
SMPD4-202ENST00000409031 CRYBB1P53674 252 aaPredicted RBP17.2■□□□□ 0.34
SMPD4-202ENST00000409031 SPCS2Q15005 226 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 EIF5AL1Q6IS14 154 aaKnown RBP17.2■□□□□ 0.34
SMPD4-202ENST00000409031 GOLGA7Q7Z5G4 137 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 COMMD2Q86X83 199 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 CFAP52Q8N1V2 620 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 POMGNT2Q8NAT1 580 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 ACTR6Q9GZN1 396 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.2■□□□□ 0.341e-6■■■■■ 32
SMPD4-202ENST00000409031 SDR39U1Q9NRG7 319 aaPredicted RBP17.2■□□□□ 0.34
SMPD4-202ENST00000409031 CALML5Q9NZT1 146 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 MARK1Q9P0L2 795 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 B4GAT1O43505 415 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 CAPN3P20807 821 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 TM4SF1P30408 202 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 CA5AP35218 305 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 GMPRP36959 345 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 CAMK1Q14012 370 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 PTGR1Q14914 329 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 GDPGP1Q6ZNW5 385 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 MOB2Q70IA6 237 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 RNF44Q7L0R7 432 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 ZFAND4Q86XD8 727 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 INO80EQ8NBZ0 244 aaPredicted RBP17.2■□□□□ 0.34
SMPD4-202ENST00000409031 KCTD13Q8WZ19 329 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 MRPL9Q9BYD2 267 aaKnown RBP17.2■□□□□ 0.34
SMPD4-202ENST00000409031 FKBP14Q9NWM8 211 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 EXTL2Q9UBQ6 330 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 FKBP7Q9Y680 259 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 IRAK2O43187 625 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 ARL6IP5O75915 188 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 PRKAR2AP13861 404 aaKnown RBP17.19■□□□□ 0.34
SMPD4-202ENST00000409031 KDELR2P33947 212 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 STC1P52823 247 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 CDK6Q00534 326 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 RAPSNQ13702 412 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 CADM2Q8N3J6 435 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 ZNF557Q8N988 423 aaPredicted RBP17.19■□□□□ 0.34
SMPD4-202ENST00000409031 SLC32A1Q9H598 525 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 CUEDC1Q9NWM3 386 aaPredicted RBP17.19■□□□□ 0.34
SMPD4-202ENST00000409031 HPF1Q9NWY4 346 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 PCDHGB1Q9Y5G3 927 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 A0A096LPI6 279 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 APOC3P02656 99 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 EBLN1P0CF75 366 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 LAMP2P13473 410 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 ARFIP1P53367 373 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 LARS2Q15031 903 aaKnown RBP17.19■□□□□ 0.34
SMPD4-202ENST00000409031 SIRPB2Q5JXA9 342 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 KANK2Q63ZY3 851 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 ANKRD54Q6NXT1 300 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 LYSMD3Q7Z3D4 306 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 CEP97Q8IW35 865 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 MED30Q96HR3 178 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 SLC30A3Q99726 388 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 TMED9Q9BVK6 235 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 BTBD1Q9H0C5 482 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 ABCG5Q9H222 651 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 DNAJC27Q9NZQ0 273 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 TNFRSF10DQ9UBN6 386 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 IQCF5A8MTL0 148 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 MANBAO00462 879 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 NRP1O14786 923 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 TBL1XO60907 577 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 DCTP40126 519 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 SSR2P43308 183 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 PSMA6P60900 246 aaKnown RBP17.19■□□□□ 0.34
SMPD4-202ENST00000409031 FRG2Q64ET8 278 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 KIAA1161Q6NSJ0 714 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 IQCF2Q8IXL9 164 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 RPLP0P6Q8NHW5 317 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 ASB15Q8WXK1 588 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 FRG2BQ96QU4 278 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 PKP4Q99569 1192 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 SPG21Q9NZD8 308 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 EMCNQ9ULC0 261 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 PCDHGA8Q9Y5G5 932 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 MAGED1Q9Y5V3 778 aaPredicted RBP17.19■□□□□ 0.34
SMPD4-202ENST00000409031 HCN1O60741 890 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 LCKP06239 509 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 TACR2P21452 398 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 C1QTNF8P60827 252 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 SLC10A2Q12908 348 aaPredicted RBP17.19■□□□□ 0.34
SMPD4-202ENST00000409031 ZNHIT3Q15649 155 aaPredicted RBP17.19■□□□□ 0.34
SMPD4-202ENST00000409031 VMACQ2NL98 169 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 C4orf46Q504U0 113 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 C17orf64Q86WR6 236 aa17.19■□□□□ 0.34
SMPD4-202ENST00000409031 NLKQ9UBE8 527 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms