RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ZNF99A8MXY4 864 aaPredicted RBP11.75□□□□□ -0.53
SMCR8-201ENST00000406438 SNAPC5O75971 98 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 CCNOP22674 350 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 ARL2P36404 184 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 NOXRED1Q6NXP6 359 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 C1orf127Q8N9H9 656 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 PCDHB16Q9NRJ7 776 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 ZNF670-ZNF695F2Z2N8 137 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 RCBTB2O95199 551 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 KLK1P06870 262 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 GJA1P17302 382 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 CLRN1P58418 232 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 DSTNP60981 165 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 CRHR2Q13324 411 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 SLBPQ14493 270 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMCR8-201ENST00000406438 HERC3Q15034 1050 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 EOGTQ5NDL2 527 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 PAOXQ6QHF9 649 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 GPAT4Q86UL3 456 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 PYROXD2Q8N2H3 581 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 JAGN1Q8N5M9 183 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 CYB5D2Q8WUJ1 264 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 KLRG1Q96E93 195 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 YIPF4Q9BSR8 244 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMCR8-201ENST00000406438 ZDHHC3Q9NYG2 299 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 ASB3Q9Y575 518 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 SCN2AQ99250 2005 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 C9JVG2 144 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 DHPSP49366 369 aaPredicted RBP11.75□□□□□ -0.53
SMCR8-201ENST00000406438 BEND4Q6ZU67 534 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 CMTM7Q96FZ5 175 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 SDCBP2Q9H190 292 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 NELFAQ9H3P2 528 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 KCNN3Q9UGI6 736 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 DKKL1Q9UK85 242 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 SNX10Q9Y5X0 201 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 EDDM13A0A1B0GTR0 161 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 CPED1A4D0V7 1026 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 FAM149AA5PLN7 773 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 BTBD19C9JJ37 291 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 TPGS2Q68CL5 300 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 TMEM214Q6NUQ4 689 aaKnown RBP11.75□□□□□ -0.53
SMCR8-201ENST00000406438 GKN2Q86XP6 184 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 C9orf43Q8TAL5 461 aaPredicted RBP11.75□□□□□ -0.53
SMCR8-201ENST00000406438 UCK2Q9BZX2 261 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 TFB2MQ9H5Q4 396 aaKnown RBP11.75□□□□□ -0.53
SMCR8-201ENST00000406438 MALT1Q9UDY8 824 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 SERTAD3Q9UJW9 196 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 GNG8Q9UK08 70 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 FZD4Q9ULV1 537 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 MAFBQ9Y5Q3 323 aaPredicted RBP11.75□□□□□ -0.53
SMCR8-201ENST00000406438 AGPSO00116 658 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 ADAMTS3O15072 1205 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 ZNF16P17020 682 aaPredicted RBP11.75□□□□□ -0.53
SMCR8-201ENST00000406438 DCDC1P59894 354 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 CARD16Q5EG05 197 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 TMIEQ8NEW7 156 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 NUDT15Q9NV35 164 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 PET100P0DJ07 73 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 FPGSQ05932 587 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 SLC3A1Q07837 685 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 MRPL49Q13405 166 aaKnown RBP11.75□□□□□ -0.53
SMCR8-201ENST00000406438 EFR3AQ14156 821 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 MAD2L1BPQ15013 274 aaPredicted RBP11.75□□□□□ -0.53
SMCR8-201ENST00000406438 PDCD4Q53EL6 469 aaKnown RBP11.75□□□□□ -0.53
SMCR8-201ENST00000406438 RELTQ969Z4 430 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 LRRC58Q96CX6 371 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 S100A16Q96FQ6 103 aaKnown RBP11.75□□□□□ -0.53
SMCR8-201ENST00000406438 FUBP3Q96I24 572 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMCR8-201ENST00000406438 SLC32A1Q9H598 525 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 SUV39H2Q9H5I1 410 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 ZNF446Q9NWS9 450 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 FBXL12Q9NXK8 326 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 CSNK2A2P19784 350 aaPredicted RBP11.74□□□□□ -0.53
SMCR8-201ENST00000406438 MMAAQ8IVH4 418 aaKnown RBP11.74□□□□□ -0.53
SMCR8-201ENST00000406438 DPEP3Q9H4B8 488 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 KLRG2A4D1S0 409 aaPredicted RBP11.74□□□□□ -0.53
SMCR8-201ENST00000406438 A8MU76 341 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 E7EQ34 232 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 SCAMP1O15126 338 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 MUSKO15146 869 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 CD48P09326 243 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 CD36P16671 472 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 CASP7P55210 303 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 CCM2Q9BSQ5 444 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 SSU72Q9NP77 194 aaKnown RBP11.74□□□□□ -0.53
SMCR8-201ENST00000406438 ADGRB1O14514 1584 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 CLIC1O00299 241 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 PLSCR1O15162 318 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 H1F0P07305 194 aaKnown RBP11.74□□□□□ -0.53
SMCR8-201ENST00000406438 JAM2P57087 298 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 UAP1L1Q3KQV9 507 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 GPR33Q49SQ1 333 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 PAQR7Q86WK9 346 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 COQ10BQ9H8M1 238 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 USP29Q9HBJ7 922 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 PARPBPQ9NWS1 579 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 NLGN3Q9NZ94 848 aa11.74□□□□□ -0.53
SMCR8-201ENST00000406438 GMEB2Q9UKD1 530 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms