RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 GTF2E2P29084 291 aaKnown RBP8.8□□□□□ -1
LIG4-202ENST00000405925 CD6P30203 668 aa8.8□□□□□ -1
LIG4-202ENST00000405925 NCBP2P52298 156 aaKnown RBP eCLIP8.8□□□□□ -1
LIG4-202ENST00000405925 SH3BGRP55822 239 aaPredicted RBP8.8□□□□□ -1
LIG4-202ENST00000405925 HHEXQ03014 270 aa8.8□□□□□ -1
LIG4-202ENST00000405925 TOMM20Q15388 145 aa8.8□□□□□ -1
LIG4-202ENST00000405925 ZIK1Q3SY52 487 aaPredicted RBP8.8□□□□□ -1
LIG4-202ENST00000405925 CTSL3PQ5NE16 218 aa8.8□□□□□ -1
LIG4-202ENST00000405925 ASTLQ6HA08 431 aaPredicted RBP8.8□□□□□ -1
LIG4-202ENST00000405925 SLC2A7Q6PXP3 512 aa8.8□□□□□ -1
LIG4-202ENST00000405925 UNC5DQ6UXZ4 953 aa8.8□□□□□ -1
LIG4-202ENST00000405925 TMEM150AQ86TG1 271 aa8.8□□□□□ -1
LIG4-202ENST00000405925 OR5AK3PQ8NH89 298 aa8.8□□□□□ -1
LIG4-202ENST00000405925 VANGL1Q8TAA9 524 aaPredicted RBP8.8□□□□□ -1
LIG4-202ENST00000405925 NACC2Q96BF6 587 aa8.8□□□□□ -1
LIG4-202ENST00000405925 EXOSC4Q9NPD3 245 aaKnown RBP8.8□□□□□ -1
LIG4-202ENST00000405925 FAM53CQ9NYF3 392 aa8.8□□□□□ -1
LIG4-202ENST00000405925 OTOFQ9HC10 1997 aa8.8□□□□□ -1
LIG4-202ENST00000405925 C2CD4DB7Z1M9 353 aa8.8□□□□□ -1
LIG4-202ENST00000405925 SLC22A2O15244 555 aa8.8□□□□□ -1
LIG4-202ENST00000405925 RXRGP48443 463 aa8.8□□□□□ -1
LIG4-202ENST00000405925 IDH2P48735 452 aaKnown RBP8.8□□□□□ -1
LIG4-202ENST00000405925 RPA4Q13156 261 aa8.8□□□□□ -1
LIG4-202ENST00000405925 ERICH5Q6P6B1 374 aa8.8□□□□□ -1
LIG4-202ENST00000405925 ABHD13Q7L211 337 aa8.8□□□□□ -1
LIG4-202ENST00000405925 GATAD2AQ86YP4 633 aa8.8□□□□□ -1
LIG4-202ENST00000405925 TBC1D21Q8IYX1 336 aa8.8□□□□□ -1
LIG4-202ENST00000405925 SAMD14Q8IZD0 417 aaPredicted RBP8.8□□□□□ -1
LIG4-202ENST00000405925 DDHD1Q8NEL9 900 aa8.8□□□□□ -1
LIG4-202ENST00000405925 RHBDF1Q96CC6 855 aa8.8□□□□□ -1
LIG4-202ENST00000405925 VMP1Q96GC9 406 aa8.8□□□□□ -1
LIG4-202ENST00000405925 NDEL1Q9GZM8 345 aa8.8□□□□□ -1
LIG4-202ENST00000405925 ZBTB26Q9HCK0 441 aa8.8□□□□□ -1
LIG4-202ENST00000405925 SARDHQ9UL12 918 aa8.8□□□□□ -1
LIG4-202ENST00000405925 TMED5Q9Y3A6 229 aa8.8□□□□□ -1
LIG4-202ENST00000405925 SIT1Q9Y3P8 196 aa8.8□□□□□ -1
LIG4-202ENST00000405925 GLOD5A6NK44 160 aa8.8□□□□□ -1
LIG4-202ENST00000405925 GTPBP1O00178 669 aaKnown RBP8.8□□□□□ -1
LIG4-202ENST00000405925 NUAK1O60285 661 aa8.8□□□□□ -1
LIG4-202ENST00000405925 ERN1O75460 977 aaKnown RBP8.8□□□□□ -1
LIG4-202ENST00000405925 PDYNP01213 254 aa8.8□□□□□ -1
LIG4-202ENST00000405925 JUNP05412 331 aaKnown RBP8.8□□□□□ -1
LIG4-202ENST00000405925 DHRS4L1P0CG22 281 aa8.8□□□□□ -1
LIG4-202ENST00000405925 CD9P21926 228 aa8.8□□□□□ -1
LIG4-202ENST00000405925 PTDSS1P48651 473 aaKnown RBP8.8□□□□□ -1
LIG4-202ENST00000405925 ERVPABLB-1P60509 514 aa8.8□□□□□ -1
LIG4-202ENST00000405925 SRP54P61011 504 aaKnown RBP8.8□□□□□ -1
LIG4-202ENST00000405925 OCA2Q04671 838 aa8.8□□□□□ -1
LIG4-202ENST00000405925 DLG1Q12959 904 aa8.8□□□□□ -1
LIG4-202ENST00000405925 ABRAXAS2Q15018 415 aa8.8□□□□□ -1
LIG4-202ENST00000405925 ANKRD26P1Q6NSI1 321 aa8.8□□□□□ -1
LIG4-202ENST00000405925 SYCE2Q6PIF2 218 aa8.8□□□□□ -1
LIG4-202ENST00000405925 PROSER1Q86XN7 944 aa8.8□□□□□ -1
LIG4-202ENST00000405925 TGM7Q96PF1 710 aa8.8□□□□□ -1
LIG4-202ENST00000405925 PCDHAC1Q9H158 963 aa8.8□□□□□ -1
LIG4-202ENST00000405925 SAMD4AQ9UPU9 718 aaKnown RBP8.8□□□□□ -1
LIG4-202ENST00000405925 POMPQ9Y244 141 aa8.8□□□□□ -1
LIG4-202ENST00000405925 RTCAO00442 366 aaKnown RBP8.79□□□□□ -1
LIG4-202ENST00000405925 B4GALT2O60909 372 aa8.79□□□□□ -1
LIG4-202ENST00000405925 JUPP14923 745 aa8.79□□□□□ -1
LIG4-202ENST00000405925 ITGAXP20702 1163 aa8.79□□□□□ -1
LIG4-202ENST00000405925 AOAHP28039 575 aa8.79□□□□□ -1
LIG4-202ENST00000405925 ADAM15Q13444 863 aa8.79□□□□□ -1
LIG4-202ENST00000405925 TRIM25Q14258 630 aaKnown RBP8.79□□□□□ -1
LIG4-202ENST00000405925 NOXRED1Q6NXP6 359 aa8.79□□□□□ -1
LIG4-202ENST00000405925 SLC36A4Q6YBV0 504 aa8.79□□□□□ -1
LIG4-202ENST00000405925 TREML1Q86YW5 311 aa8.79□□□□□ -1
LIG4-202ENST00000405925 KDM1BQ8NB78 822 aa8.79□□□□□ -1
LIG4-202ENST00000405925 OR4K1Q8NGD4 311 aa8.79□□□□□ -1
LIG4-202ENST00000405925 LKAAEAR1Q8TD35 194 aa8.79□□□□□ -1
LIG4-202ENST00000405925 SLC35G5Q96KT7 338 aa8.79□□□□□ -1
LIG4-202ENST00000405925 CGREF1Q99674 301 aa8.79□□□□□ -1
LIG4-202ENST00000405925 ZNF184Q99676 751 aaPredicted RBP8.79□□□□□ -1
LIG4-202ENST00000405925 YIPF4Q9BSR8 244 aa8.79□□□□□ -1
LIG4-202ENST00000405925 TRIM4Q9C037 500 aa8.79□□□□□ -1
LIG4-202ENST00000405925 ZNF282Q9UDV7 671 aaPredicted RBP8.79□□□□□ -1
LIG4-202ENST00000405925 EMCNQ9ULC0 261 aa8.79□□□□□ -1
LIG4-202ENST00000405925 KLHL20Q9Y2M5 609 aa8.79□□□□□ -1
LIG4-202ENST00000405925 TRIP11Q15643 1979 aa8.79□□□□□ -1
LIG4-202ENST00000405925 FEZF1A0PJY2 475 aa8.79□□□□□ -1
LIG4-202ENST00000405925 MATN4O95460 622 aa8.79□□□□□ -1
LIG4-202ENST00000405925 UQCRBP14927 111 aa8.79□□□□□ -1
LIG4-202ENST00000405925 AOC1P19801 751 aa8.79□□□□□ -1
LIG4-202ENST00000405925 ARNTP27540 789 aa8.79□□□□□ -1
LIG4-202ENST00000405925 ITPKBP27987 946 aa8.79□□□□□ -1
LIG4-202ENST00000405925 MPIP34949 423 aa8.79□□□□□ -1
LIG4-202ENST00000405925 PRLHRP49683 370 aa8.79□□□□□ -1
LIG4-202ENST00000405925 EPHA5P54756 1037 aa8.79□□□□□ -1
LIG4-202ENST00000405925 VSX2P58304 361 aaPredicted RBP8.79□□□□□ -1
LIG4-202ENST00000405925 CTBSQ01459 385 aa8.79□□□□□ -1
LIG4-202ENST00000405925 SPIBQ01892 262 aa8.79□□□□□ -1
LIG4-202ENST00000405925 ZNF763Q0D2J5 394 aa8.79□□□□□ -1
LIG4-202ENST00000405925 HERC3Q15034 1050 aa8.79□□□□□ -1
LIG4-202ENST00000405925 ZC3H12BQ5HYM0 836 aaKnown RBP8.79□□□□□ -1
LIG4-202ENST00000405925 MLIPQ5VWP3 458 aa8.79□□□□□ -1
LIG4-202ENST00000405925 FAAH2Q6GMR7 532 aa8.79□□□□□ -1
LIG4-202ENST00000405925 OFCC1Q8IZS5 231 aa8.79□□□□□ -1
LIG4-202ENST00000405925 PQLC1Q8N2U9 271 aa8.79□□□□□ -1
LIG4-202ENST00000405925 SP7Q8TDD2 431 aaPredicted RBP8.79□□□□□ -1
LIG4-202ENST00000405925 DNASE1L2Q92874 299 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms