RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 COL26A1Q96A83 441 aa14.64□□□□□ -0.07
TPM1-207ENST00000403994 OR2A5Q96R48 311 aa14.64□□□□□ -0.07
TPM1-207ENST00000403994 EBNA1BP2Q99848 306 aaKnown RBP14.64□□□□□ -0.07
TPM1-207ENST00000403994 ZBTB20Q9HC78 741 aaPredicted RBP14.64□□□□□ -0.07
TPM1-207ENST00000403994 ABCF3Q9NUQ8 709 aa14.64□□□□□ -0.07
TPM1-207ENST00000403994 SLC17A6Q9P2U8 582 aa14.64□□□□□ -0.07
TPM1-207ENST00000403994 ZNF282Q9UDV7 671 aaPredicted RBP14.64□□□□□ -0.07
TPM1-207ENST00000403994 ICE1Q9Y2F5 2266 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 CRYBG3Q68DQ2 2970 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 IGLV3-12A0A075B6K2 115 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 ZGLP1P0C6A0 271 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 ACPPP15309 386 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 IVDP26440 423 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 GABRB3P28472 473 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 CDKN2DP55273 166 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 ABATP80404 500 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 OCA2Q04671 838 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 SP140Q13342 867 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 PLEKHN1Q494U1 663 aaPredicted RBP14.63□□□□□ -0.07
TPM1-207ENST00000403994 SPANXN3Q5MJ09 141 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 RBM20Q5T481 1227 aaKnown RBP14.63□□□□□ -0.07
TPM1-207ENST00000403994 THEMIS2Q5TEJ8 643 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 LRRC8EQ6NSJ5 796 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 MBOAT1Q6ZNC8 495 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 IGDCC3Q8IVU1 814 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 IQCKQ8N0W5 287 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 AMER3Q8N944 861 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 TM9SF4Q92544 642 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 RERGQ96A58 199 aaPredicted RBP14.63□□□□□ -0.07
TPM1-207ENST00000403994 MIEF2Q96C03 454 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 MVB12AQ96EY5 273 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 WDR83Q9BRX9 315 aaKnown RBP14.63□□□□□ -0.07
TPM1-207ENST00000403994 NAT9Q9BTE0 207 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 ILKAPQ9H0C8 392 aaPredicted RBP14.63□□□□□ -0.07
TPM1-207ENST00000403994 PLAC1Q9HBJ0 212 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 CCDC177Q9NQR7 707 aaPredicted RBP14.63□□□□□ -0.07
TPM1-207ENST00000403994 UTP6Q9NYH9 597 aaKnown RBP14.63□□□□□ -0.07
TPM1-207ENST00000403994 C3orf18Q9UK00 162 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 ADAMTS6Q9UKP5 1117 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 CPAMD8Q8IZJ3 1885 aa14.63□□□□□ -0.07
TPM1-207ENST00000403994 FFAR3O14843 346 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 GPR42O15529 346 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 PRPF4O43172 522 aaKnown RBP eCLIP14.62□□□□□ -0.073e-6■■□□□ 14.1
TPM1-207ENST00000403994 ZBTB14O43829 449 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 CARSP49589 748 aaKnown RBP14.62□□□□□ -0.07
TPM1-207ENST00000403994 RELAQ04206 551 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 BBS9Q3SYG4 887 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 KIAA0408Q6ZU52 694 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 PCGF5Q86SE9 256 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 PLD3Q8IV08 490 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 GABPB2Q8TAK5 448 aaPredicted RBP14.62□□□□□ -0.07
TPM1-207ENST00000403994 EEF1AKMT1Q8WVE0 214 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 CERS2Q96G23 380 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 CAPZA3Q96KX2 299 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 SLC29A3Q9BZD2 475 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 DRC3Q9H069 523 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 C14orf105Q9NVL8 296 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 TAS2R13Q9NYV9 303 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 MAP10Q9P2G4 905 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 SH2B3Q9UQQ2 575 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 PDE10AQ9Y233 779 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 PCDHGA10Q9Y5H3 936 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 CSAG2Q9Y5P2 127 aa14.62□□□□□ -0.07
TPM1-207ENST00000403994 TCP11X1B4DZS4 312 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 MAP2K7O14733 419 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 HPP00738 406 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 C8GP07360 202 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 VARSP26640 1264 aaKnown RBP14.61□□□□□ -0.07
TPM1-207ENST00000403994 RGS4P49798 205 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 SNRPNP63162 240 aaKnown RBP14.61□□□□□ -0.07
TPM1-207ENST00000403994 Q0VFX4 171 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 MRPL49Q13405 166 aaKnown RBP14.61□□□□□ -0.07
TPM1-207ENST00000403994 MORF4L2Q15014 288 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 PHKG1Q16816 387 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 VWA2Q5GFL6 755 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 GARNL3Q5VVW2 1013 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 UGT3A1Q6NUS8 523 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 Q6ZS92 163 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 GALNT7Q86SF2 657 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 CUZD1Q86UP6 607 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 ZADH2Q8N4Q0 377 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 PPP4R1Q8TF05 950 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 C8orf44Q96CB5 159 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 SNRNP40Q96DI7 357 aaKnown RBP14.61□□□□□ -0.07
TPM1-207ENST00000403994 C19orf60Q96EN9 201 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 LINGO1Q96FE5 620 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 CFAP36Q96G28 342 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 VPS50Q96JG6 964 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 WDR77Q9BQA1 342 aaPredicted RBP14.61□□□□□ -0.07
TPM1-207ENST00000403994 TRIM51Q9BSJ1 452 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 LHPPQ9H008 270 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 TRPC4Q9UBN4 977 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 CDC14AQ9UNH5 594 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 CHMP2BQ9UQN3 213 aa14.61□□□□□ -0.07
TPM1-207ENST00000403994 A0A0A6YYC8 382 aaPredicted RBP14.6□□□□□ -0.07
TPM1-207ENST00000403994 A0A1W2PQ72 361 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 IDSB3KWA1 339 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 H7BY64 318 aa14.6□□□□□ -0.07
TPM1-207ENST00000403994 I3L1I5 382 aaPredicted RBP14.6□□□□□ -0.07
TPM1-207ENST00000403994 FOXS1O43638 330 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms