RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 FNDC8Q8TC99 324 aa15.44■□□□□ 0.06
CHRFAM7A-203ENST00000401522 NUDT8Q8WV74 236 aa15.44■□□□□ 0.06
CHRFAM7A-203ENST00000401522 HDAC2Q92769 488 aaKnown RBP15.44■□□□□ 0.06
CHRFAM7A-203ENST00000401522 USP7Q93009 1102 aa15.44■□□□□ 0.06
CHRFAM7A-203ENST00000401522 FAM162AQ96A26 154 aa15.44■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ARRDC3Q96B67 414 aa15.44■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ULK4Q96C45 1275 aa15.44■□□□□ 0.06
CHRFAM7A-203ENST00000401522 THAP11Q96EK4 314 aa15.44■□□□□ 0.06
CHRFAM7A-203ENST00000401522 SCRN2Q96FV2 425 aa15.44■□□□□ 0.06
CHRFAM7A-203ENST00000401522 PHF12Q96QT6 1004 aa15.44■□□□□ 0.06
CHRFAM7A-203ENST00000401522 MAGIXQ9H6Y5 334 aa15.44■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CARS2Q9HA77 564 aaKnown RBP15.44■□□□□ 0.06
CHRFAM7A-203ENST00000401522 KLHL42Q9P2K6 505 aa15.44■□□□□ 0.06
CHRFAM7A-203ENST00000401522 TCRBV21S2A2A0A5A6 115 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 FAM220BPB1ANY3 271 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CXCR6O00574 342 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 SEC22BO75396 215 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 RETP07949 1114 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CBSLP0DN79 551 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 PCNAP12004 261 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 TIMP2P16035 220 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 PCSK2P16519 638 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 GABRG2P18507 467 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 EEF1B2P24534 225 aaKnown RBP15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CBSP35520 551 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 SPAM1P38567 509 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 YAP1P46937 504 aaKnown RBP15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 PTPN5P54829 565 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 PLIN5Q00G26 463 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CDKN3Q16667 212 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 POM121L1PQ3SYA9 428 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 SPANXN4Q5MJ08 99 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ENPP6Q6UWR7 440 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 MSRB3Q8IXL7 192 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 MICU2Q8IYU8 434 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CLDN19Q8N6F1 224 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 PAF1Q8N7H5 531 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ZNF555Q8NEP9 628 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 FBXO30Q8TB52 745 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 PPP1R14BQ96C90 147 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 RBM4BQ9BQ04 359 aaKnown RBP15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 RBM4Q9BWF3 364 aaKnown RBP15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 OSBPL10Q9BXB5 764 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 TOR3AQ9H497 397 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ACTR8Q9H981 624 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 DYRK4Q9NR20 520 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 LATS2Q9NRM7 1088 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 C1orf109Q9NX04 203 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CROCCQ5TZA2 2017 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 TRBV5-3A0A0A0MS03 114 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 SH3PXD2BA1X283 911 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 MID1O15344 667 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ABCB7O75027 752 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ERN1O75460 977 aaKnown RBP15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 SEC14L2O76054 403 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CST1P01037 141 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 KRT6AP02538 564 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 DNTTP04053 509 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 KRT6BP04259 564 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 BPIP17213 487 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 IL1RNP18510 177 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 NDUFV2P19404 249 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ELK4P28324 431 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CA5AP35218 305 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 DRD3P35462 400 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 HNF1BP35680 557 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 GDF5P43026 501 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 KRT6CP48668 564 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ENTPD1P49961 510 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 HMGCS1Q01581 520 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CHRNA6Q15825 494 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ERN2Q76MJ5 926 aaKnown RBP15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 PARS2Q7L3T8 475 aaKnown RBP15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 RGL4Q8IZJ4 473 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 FAM9CQ8IZT9 166 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 NXPE1Q8N323 547 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 FAM86B1Q8N7N1 296 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 FAM131CQ96AQ9 280 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 SIPA1Q96FS4 1042 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 MAGED4Q96JG8 741 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 OR52E6Q96RD3 313 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 MCCC1Q96RQ3 725 aaPredicted RBP15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 LYSMD1Q96S90 227 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 FARSBQ9NSD9 589 aaKnown RBP15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 FAM118AQ9NWS6 357 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 KCTD5Q9NXV2 234 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 SLC25A37Q9NYZ2 338 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 INVSQ9Y283 1065 aa15.43■□□□□ 0.06
CHRFAM7A-203ENST00000401522 TTC28Q96AY4 2481 aa15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 UPK3BL1B0FP48 263 aa15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 UPK3BL2E5RIL1 263 aa15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 STK16O75716 305 aa15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CLDN7O95471 211 aa15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CLDN9O95484 217 aa15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 GABARAPL2P60520 117 aa15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 PPP2R2BQ00005 443 aa15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 NKG7Q16617 165 aa15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 USP39Q53GS9 565 aaKnown RBP15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 SGO1Q5FBB7 561 aa15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 MBOAT4Q96T53 435 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms