RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 A6NL46 340 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 PLK4O00444 970 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 RNF13O43567 381 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 SRCP12931 536 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 HCAR3P49019 387 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 YBEYP58557 167 aaPredicted RBP13.4□□□□□ -0.26
VAPA-202ENST00000400000 RPP38P78345 283 aaKnown RBP13.4□□□□□ -0.26
VAPA-202ENST00000400000 TXNRD3NBQ6F5E7 133 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 ADNP2Q6IQ32 1131 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 AAGABQ6PD74 315 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 LRRC70Q7Z2Q7 622 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 ZNF516Q92618 1163 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 NODALQ96S42 347 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 CCM2Q9BSQ5 444 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 UCK2Q9BZX2 261 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 KCNS2Q9ULS6 477 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 A0A0D9SEW6 157 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.4□□□□□ -0.26
VAPA-202ENST00000400000 CXorf49A8MYA2 514 aaPredicted RBP13.4□□□□□ -0.26
VAPA-202ENST00000400000 SOX1O00570 391 aaPredicted RBP13.4□□□□□ -0.26
VAPA-202ENST00000400000 HSPA12AO43301 675 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 LATO43561 262 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 SCO2O43819 266 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 MAGEA12P43365 314 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 MECP2P51608 486 aaKnown RBP13.4□□□□□ -0.26
VAPA-202ENST00000400000 CLRN1P58418 232 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 SYT16Q17RD7 645 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 FBXL22Q6P050 247 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 LRRTM4Q86VH4 590 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 OR6N1Q8NGY5 312 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 SLC13A3Q8WWT9 602 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 CNTN3Q9P232 1028 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 DKK3Q9UBP4 350 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 IQGAP1P46940 1657 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 OR2AT4A6NND4 320 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 WASHC1A8K0Z3 465 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 PI15O43692 258 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 CRISP3P54108 245 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 ZMYND11Q15326 602 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 GXYLT1Q4G148 440 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 PDCD4Q53EL6 469 aaKnown RBP13.4□□□□□ -0.26
VAPA-202ENST00000400000 WASH2PQ6VEQ5 465 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 HM13Q8TCT9 377 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 PCDHGA11Q9Y5H2 935 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 H0YGN5 161 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 ATP5A1P25705 553 aaKnown RBP13.4□□□□□ -0.26
VAPA-202ENST00000400000 DEFA5Q01523 94 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 FAM180BQ6P0A1 224 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 P2RY8Q86VZ1 359 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 LSM14AQ8ND56 463 aaKnown RBP13.4□□□□□ -0.26
VAPA-202ENST00000400000 TSACCQ96A04 125 aaPredicted RBP13.4□□□□□ -0.26
VAPA-202ENST00000400000 TMEM125Q96AQ2 219 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 POLR2J3Q9H1A7 115 aaKnown RBP13.4□□□□□ -0.26
VAPA-202ENST00000400000 STOX2Q9P2F5 926 aaPredicted RBP13.4□□□□□ -0.26
VAPA-202ENST00000400000 TLR6Q9Y2C9 796 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 PCDHB3Q9Y5E6 796 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 BTNL10A8MVZ5 291 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 LSM1O15116 133 aaKnown RBP13.4□□□□□ -0.26
VAPA-202ENST00000400000 APOC1P02654 83 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 PGGT1BP53609 377 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 EOGTQ5NDL2 527 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 FRMD7Q6ZUT3 714 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 USP53Q70EK8 1073 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 TMEM130Q8N3G9 435 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 OR10G2Q8NGC3 310 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 SHDQ96IW2 340 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 GPR174Q9BXC1 333 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 PIGVQ9NUD9 493 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 LYARQ9NX58 379 aaKnown RBP13.4□□□□□ -0.26
VAPA-202ENST00000400000 IFT52Q9Y366 437 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 MAU2Q9Y6X3 613 aa13.4□□□□□ -0.26
VAPA-202ENST00000400000 LOC730098B7Z3J9 87 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 CDH1P12830 882 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 GBX2P52951 348 aaPredicted RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 DSTNP60981 165 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 NAA20P61599 178 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 EIPR1Q53HC9 387 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 TMEM209Q96SK2 561 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 RC3H2Q9HBD1 1191 aaKnown RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 SDHAF3Q9NRP4 125 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 FARSBQ9NSD9 589 aaKnown RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 RNF11Q9Y3C5 154 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 PCDHGB5Q9Y5G0 923 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 FEZF1A0PJY2 475 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 PAK4O96013 591 aaPredicted RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 AOC1P19801 751 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 MATN1P21941 496 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 S100A1P23297 94 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 PXNP49023 591 aaPredicted RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 DCDC1P59894 354 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 OLR1P78380 273 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 WDR12Q9GZL7 423 aaKnown RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 NKX2-4Q9H2Z4 354 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 OR51B6Q9H340 312 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 DHX33Q9H6R0 707 aaKnown RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 ZNF180Q9UJW8 692 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 MAP2K7O14733 419 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 PRKACGP22612 351 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 ARPC4P59998 168 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 OGDHQ02218 1023 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms