RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 C10orf62Q5T681 223 aaPredicted RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 RASGRP3Q8IV61 690 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 FAM151AQ8WW52 585 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 KCNN1Q92952 543 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 SNX18Q96RF0 628 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 C2orf49Q9BVC5 232 aaPredicted RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 NIFKQ9BYG3 293 aaKnown RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 PROM1O43490 865 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 ANGPTL7O43827 346 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 NDUFV1P49821 464 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 OAZ1P54368 228 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 PPATQ06203 517 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 PIAS4Q8N2W9 510 aaPredicted RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 KCT2Q8NC54 265 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 ARL11Q969Q4 196 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 WDR77Q9BQA1 342 aaPredicted RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 TTYH2Q9BSA4 534 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 SNRNP25Q9BV90 132 aaKnown RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 ZNF436Q9C0F3 470 aaPredicted RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 MRPL17Q9NRX2 175 aaKnown RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 KANSL3Q9P2N6 904 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 ANKMY1Q9P2S6 941 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 EME2A4GXA9 379 aaPredicted RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 C22orf31O95567 290 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 SNAP29O95721 258 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 PAHP00439 452 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 CD247P20963 164 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 FOXN2P32314 431 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 FNTBP49356 437 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 FGL2Q14314 439 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 HMGN3Q15651 99 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 IL23RQ5VWK5 629 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 TLDC1Q6P9B6 456 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 PRSS58Q8IYP2 241 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 DEFB106AQ8N104 65 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 PIGBQ92521 554 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 SDCBP2Q9H190 292 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 C19orf12Q9NSK7 152 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 CENPMQ9NSP4 180 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 OXSMQ9NWU1 459 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 SAGE1Q9NXZ1 904 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 OR12D3Q9UGF7 316 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 ACAD8Q9UKU7 415 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 GADD45GO95257 159 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 SNAPINO95295 136 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 APOC3P02656 99 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 HOXD8P13378 290 aaPredicted RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 IRF2P14316 349 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 FASTKD3Q14CZ7 662 aaKnown RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 PRAMEF18Q5VWM3 479 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 XKR5Q6UX68 686 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 TMPRSS7Q7RTY8 843 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 NOXA1Q86UR1 476 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 NAT16Q8N8M0 369 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 BEST4Q8NFU0 473 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 STK35Q8TDR2 534 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 LRRC58Q96CX6 371 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 TMEM80Q96HE8 168 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 CORO1BQ9BR76 489 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 RPF2Q9H7B2 306 aaKnown RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 ZBTB26Q9HCK0 441 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 PNO1Q9NRX1 252 aaKnown RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 TAS2R10Q9NYW0 307 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 SIX4Q9UIU6 781 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 ADAM18Q9Y3Q7 739 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 SPIN1Q9Y657 262 aaPredicted RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 BICRAQ9NZM4 1560 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 ANKRD12Q6UB98 2062 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 C2orf72A6NCS6 295 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 TNFSF12O43508 249 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 TBL1XO60907 577 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 LILRB5O75023 590 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 ANKDD1AQ495B1 522 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 COMMD7Q86VX2 200 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 ZNF619Q8N2I2 560 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 SLC25A36Q96CQ1 311 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 POLR2J3Q9H1A7 115 aaKnown RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 OR51E2Q9H255 320 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 PAK1IP1Q9NWT1 392 aaPredicted RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 PACSIN3Q9UKS6 424 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 MT-ND2P03891 347 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 ZNF286BP0CG31 522 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 CETPP11597 493 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 IL1R1P14778 569 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 MYF6P23409 242 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 CDH8P55286 799 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 CLCQ05315 142 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 EIF2B1Q14232 305 aaKnown RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 MLC1Q15049 377 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 KRBOX4Q5JUW0 171 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 TMEM214Q6NUQ4 689 aaKnown RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 NOXRED1Q6NXP6 359 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 HJURPQ8NCD3 748 aaPredicted RBP8.18□□□□□ -1.1
CHD8-201ENST00000399982 FAM110BQ8TC76 370 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 TCF25Q9BQ70 676 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 GFOD1Q9NXC2 390 aa8.18□□□□□ -1.1
CHD8-201ENST00000399982 XPNPEP2O43895 674 aa8.17□□□□□ -1.1
CHD8-201ENST00000399982 CREBL2O60519 120 aaPredicted RBP8.17□□□□□ -1.1
CHD8-201ENST00000399982 USP17L7P0C7H9 530 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms