RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 RPS17P08708 135 aaKnown RBP16.58■□□□□ 0.24
PTPRA-205ENST00000399903 POU1F1P28069 291 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 VLDLRP98155 873 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 ALDH6A1Q02252 535 aaKnown RBP16.58■□□□□ 0.24
PTPRA-205ENST00000399903 ST3GAL4Q11206 333 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 GLB1LQ6UWU2 654 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 MRPL10Q7Z7H8 261 aaKnown RBP16.58■□□□□ 0.24
PTPRA-205ENST00000399903 GRAMD2AQ8IUY3 354 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 LAX1Q8IWV1 398 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 CACTIN-AS1Q8N1I8 211 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 HMCESQ96FZ2 354 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 DPH2Q9BQC3 489 aaPredicted RBP16.58■□□□□ 0.24
PTPRA-205ENST00000399903 NUSAP1Q9BXS6 441 aaKnown RBP16.58■□□□□ 0.24
PTPRA-205ENST00000399903 DYRK4Q9NR20 520 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 IMPAD1Q9NX62 359 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 TET1Q8NFU7 2136 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 NPPAP01160 153 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 PSKH1P11801 424 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 PIK3CBP42338 1070 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 HSPA7P48741 367 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 CASP9P55211 416 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 NKX3-2P78367 333 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 IHHQ14623 411 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 RUNDC3AQ59EK9 446 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 FAM171A1Q5VUB5 890 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 SLC46A3Q7Z3Q1 461 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 MSRB3Q8IXL7 192 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 MYDGFQ969H8 173 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 EXOC2Q96KP1 924 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 OR5M11Q96RB7 305 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 THUMPD1Q9NXG2 353 aaKnown RBP16.58■□□□□ 0.24
PTPRA-205ENST00000399903 TRPM7Q96QT4 1865 aa16.58■□□□□ 0.24
PTPRA-205ENST00000399903 CDK2AP1O14519 115 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 GPR39O43194 453 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 MYL9P24844 172 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 PTGS2P35354 604 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 HK3P52790 923 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 DSC3Q14574 896 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 CCSAPQ6IQ19 270 aaPredicted RBP16.57■□□□□ 0.24
PTPRA-205ENST00000399903 CAPN13Q6MZZ7 669 aaPredicted RBP16.57■□□□□ 0.24
PTPRA-205ENST00000399903 TIGD7Q6NT04 549 aaPredicted RBP16.57■□□□□ 0.24
PTPRA-205ENST00000399903 ZNF605Q86T29 641 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 TSPYL5Q86VY4 417 aaPredicted RBP16.57■□□□□ 0.24
PTPRA-205ENST00000399903 EFHBQ8N7U6 833 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 YIPF7Q8N8F6 280 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 ANKK1Q8NFD2 765 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 OR8H1Q8NGG4 311 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 RHEBL1Q8TAI7 183 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 ENKURQ8TC29 256 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 SLC7A6Q92536 515 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 IPPKQ9H8X2 491 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 MYLKQ15746 1914 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 TRAV19A0A0A6YYK7 116 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 LDB2O43679 373 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 SNX4O95219 450 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 HOXA9P31269 272 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 RFX2P48378 723 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 AIF1P55008 147 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 HOXC5Q00444 222 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 GRIK2Q13002 908 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 ZNF557Q8N988 423 aaPredicted RBP16.57■□□□□ 0.24
PTPRA-205ENST00000399903 IPCEF1Q8WWN9 437 aaPredicted RBP16.57■□□□□ 0.24
PTPRA-205ENST00000399903 UBA2Q9UBT2 640 aaPredicted RBP16.57■□□□□ 0.24
PTPRA-205ENST00000399903 CLCA3PQ9Y6N3 262 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 HMX3A6NHT5 357 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 RGS6P49758 472 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 RENBPP51606 427 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 PROX2Q3B8N5 592 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 YIF1BQ5BJH7 314 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 ANGPTL8Q6UXH0 198 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 GGHQ92820 318 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 SEPT5Q99719 369 aaPredicted RBP16.57■□□□□ 0.24
PTPRA-205ENST00000399903 DHRS9Q9BPW9 319 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 CSNK1G1Q9HCP0 422 aa16.57■□□□□ 0.24
PTPRA-205ENST00000399903 ARHGAP33O14559 1287 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 IRAK2O43187 625 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 FABP3P05413 133 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 ZRANB3Q5FWF4 1079 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 PDZK1Q5T2W1 519 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 GPR149Q86SP6 731 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 OR4K2Q8NGD2 314 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 LRRC20Q8TCA0 184 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 FAM193BQ96PV7 902 aaPredicted RBP16.56■□□□□ 0.24
PTPRA-205ENST00000399903 ZSCAN5AQ9BUG6 496 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 TM9SF3Q9HD45 589 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 PCDHB5Q9Y5E4 795 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 CACNG3O60359 315 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 ZNF623O75123 536 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 CPSF4O95639 269 aaKnown RBP16.56■□□□□ 0.24
PTPRA-205ENST00000399903 ADORA3P0DMS8 318 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 TNFRSF1BP20333 461 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 DNAJA1P31689 397 aaKnown RBP16.56■□□□□ 0.24
PTPRA-205ENST00000399903 UGT2B10P36537 528 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 RUNX1T1Q06455 604 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 KEAP1Q14145 624 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 PM20D1Q6GTS8 502 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 KLHDC9Q8NEP7 349 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 APH1BQ8WW43 257 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 DPF3Q92784 378 aa16.56■□□□□ 0.24
PTPRA-205ENST00000399903 ULK4Q96C45 1275 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms