RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 SLC6A14Q9UN76 642 aa26.45■■□□□ 1.82
CPNE1-203ENST00000397442 R4GN57 208 aa26.45■■□□□ 1.82
CPNE1-203ENST00000397442 SLC28A1O00337 649 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 UBOX5O94941 541 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 ALDOCP09972 364 aaKnown RBP26.44■■□□□ 1.82
CPNE1-203ENST00000397442 LBPP18428 481 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 POLR2CP19387 275 aaPredicted RBP26.44■■□□□ 1.82
CPNE1-203ENST00000397442 CSNK1G2P78368 415 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 HMGCS1Q01581 520 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 GALNTL6Q49A17 601 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 C6orf136Q5SQH8 315 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 KIAA1614Q5VZ46 1190 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 ZNF771Q7L3S4 317 aaPredicted RBP26.44■■□□□ 1.82
CPNE1-203ENST00000397442 OR10G6Q8NH81 332 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 SAP25Q8TEE9 199 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 G3BP2Q9UN86 482 aaKnown RBP26.44■■□□□ 1.82
CPNE1-203ENST00000397442 DMDP11532 3685 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 REEP5Q00765 189 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 SLC22A18Q96BI1 424 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 LOXL4Q96JB6 756 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 MTERF1Q99551 399 aaKnown RBP26.44■■□□□ 1.82
CPNE1-203ENST00000397442 GAREM1Q9H706 876 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 ACTR10Q9NZ32 417 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 TSC22D4Q9Y3Q8 395 aa26.44■■□□□ 1.82
CPNE1-203ENST00000397442 CAPN14A8MX76 684 aa26.43■■□□□ 1.82
CPNE1-203ENST00000397442 UBDO15205 165 aa26.43■■□□□ 1.82
CPNE1-203ENST00000397442 RGS14O43566 566 aa26.43■■□□□ 1.82
CPNE1-203ENST00000397442 EPN2O95208 641 aa26.43■■□□□ 1.82
CPNE1-203ENST00000397442 UGT2B7P16662 529 aa26.43■■□□□ 1.82
CPNE1-203ENST00000397442 NR6A1Q15406 480 aa26.43■■□□□ 1.82
CPNE1-203ENST00000397442 TMIGD1Q6UXZ0 262 aa26.43■■□□□ 1.82
CPNE1-203ENST00000397442 GATAD2AQ86YP4 633 aa26.43■■□□□ 1.82
CPNE1-203ENST00000397442 TREML1Q86YW5 311 aa26.43■■□□□ 1.82
CPNE1-203ENST00000397442 CPSF7Q8N684 471 aaKnown RBP26.43■■□□□ 1.82
CPNE1-203ENST00000397442 HUS1BQ8NHY5 278 aa26.43■■□□□ 1.82
CPNE1-203ENST00000397442 COL25A1Q9BXS0 654 aaPredicted RBP26.43■■□□□ 1.82
CPNE1-203ENST00000397442 LILRA5A6NI73 299 aa26.42■■□□□ 1.82
CPNE1-203ENST00000397442 DFNA5O60443 496 aa26.42■■□□□ 1.82
CPNE1-203ENST00000397442 NRP2O60462 931 aa26.42■■□□□ 1.82
CPNE1-203ENST00000397442 PCNAP12004 261 aa26.42■■□□□ 1.82
CPNE1-203ENST00000397442 CMPK1P30085 196 aa26.42■■□□□ 1.82
CPNE1-203ENST00000397442 HIST2H2ACQ16777 129 aaPredicted RBP26.42■■□□□ 1.82
CPNE1-203ENST00000397442 ATP6AP1LQ52LC2 224 aa26.42■■□□□ 1.82
CPNE1-203ENST00000397442 HIST2H2AA3Q6FI13 130 aa26.42■■□□□ 1.82
CPNE1-203ENST00000397442 SLC35F3Q8IY50 421 aa26.42■■□□□ 1.82
CPNE1-203ENST00000397442 KRT78Q8N1N4 520 aa26.42■■□□□ 1.82
CPNE1-203ENST00000397442 ARL10Q8N8L6 244 aa26.42■■□□□ 1.82
CPNE1-203ENST00000397442 REPS1Q96D71 796 aa26.42■■□□□ 1.82
CPNE1-203ENST00000397442 AIF1LQ9BQI0 150 aa26.42■■□□□ 1.82
CPNE1-203ENST00000397442 DPH7Q9BTV6 452 aa26.42■■□□□ 1.82
CPNE1-203ENST00000397442 HRASLS2Q9NWW9 162 aa26.42■■□□□ 1.82
CPNE1-203ENST00000397442 ENTPD2Q9Y5L3 495 aa26.42■■□□□ 1.82
CPNE1-203ENST00000397442 COPG1Q9Y678 874 aaKnown RBP26.42■■□□□ 1.82
CPNE1-203ENST00000397442 OR5K3A6NET4 321 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 MAGEB17A8MXT2 336 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 NPIPB8E9PQR5 432 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 ARHGAP33O14559 1287 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 CCNDBP1O95273 360 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 CSTF3Q12996 717 aaKnown RBP26.41■■□□□ 1.82
CPNE1-203ENST00000397442 SPRED3Q2MJR0 410 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 ZNF425Q6IV72 752 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 VN1R5Q7Z5H4 357 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 GBP7Q8N8V2 638 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-203ENST00000397442 OR2I1PQ8NGU4 316 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 RSC1A1Q92681 617 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 UBE2E3Q969T4 207 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 TMEM184CQ9NVA4 438 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 NLGN3Q9NZ94 848 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 GSAPA4D1B5 854 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 PRPH2P23942 346 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 MPLP40238 635 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 DDX39BQ13838 428 aaKnown RBP26.41■■□□□ 1.82
CPNE1-203ENST00000397442 IMPG1Q17R60 797 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 AP5B1Q2VPB7 878 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 RFTN2Q52LD8 501 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-203ENST00000397442 C10orf62Q5T681 223 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-203ENST00000397442 ANKRD53Q8N9V6 530 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 PPP3R2Q96LZ3 170 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 LDHAL6BQ9BYZ2 381 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-203ENST00000397442 PITHD1Q9GZP4 211 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-203ENST00000397442 ARRDC1-AS1Q9H2J1 176 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 SMOC1Q9H4F8 434 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 NT5DC2Q9H857 520 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 BRF2Q9HAW0 419 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 KLHL20Q9Y2M5 609 aa26.41■■□□□ 1.82
CPNE1-203ENST00000397442 FEZF1A0PJY2 475 aa26.4■■□□□ 1.82
CPNE1-203ENST00000397442 C2orf74A8MZ97 194 aa26.4■■□□□ 1.82
CPNE1-203ENST00000397442 YKT6O15498 198 aa26.4■■□□□ 1.82
CPNE1-203ENST00000397442 RSL1D1O76021 490 aaKnown RBP26.4■■□□□ 1.82
CPNE1-203ENST00000397442 HSD3B1P14060 373 aa26.4■■□□□ 1.82
CPNE1-203ENST00000397442 TYRP1P17643 537 aa26.4■■□□□ 1.82
CPNE1-203ENST00000397442 CXCR2P25025 360 aa26.4■■□□□ 1.82
CPNE1-203ENST00000397442 HSD3B2P26439 372 aa26.4■■□□□ 1.82
CPNE1-203ENST00000397442 GRIA3P42263 894 aa26.4■■□□□ 1.82
CPNE1-203ENST00000397442 ERVK-8P63133 956 aa26.4■■□□□ 1.82
CPNE1-203ENST00000397442 CCDC6Q16204 474 aa26.4■■□□□ 1.82
CPNE1-203ENST00000397442 ZNF438Q7Z4V0 828 aa26.4■■□□□ 1.82
CPNE1-203ENST00000397442 SPATA19Q7Z5L4 167 aa26.4■■□□□ 1.82
CPNE1-203ENST00000397442 TRIM73Q86UV7 250 aa26.4■■□□□ 1.82
CPNE1-203ENST00000397442 RHBGQ9H310 441 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms