RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 FLVCR1-AS1Q8TAF5 88 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 SLC5A11Q8WWX8 675 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 SH3KBP1Q96B97 665 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 TBC1D10AQ9BXI6 508 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 TMEM120AQ9BXJ8 343 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 SLC29A3Q9BZD2 475 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 TUBB1Q9H4B7 451 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 EHD1Q9H4M9 534 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 KCNK4Q9NYG8 393 aa16.31■□□□□ 0.2
TSPAN4-205ENST00000397406 DMXL2Q8TDJ6 3036 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 A0A0G2JND7 137 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 OR6C74A6NCV1 312 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 LILRA5A6NI73 299 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 TRIM38O00635 465 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 SKAP2O75563 359 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 CRCPO75575 148 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 C1GALT1C1LP0DN25 315 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 CDH1P12830 882 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 JUPP14923 745 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 INHBCP55103 352 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 PRDX1Q06830 199 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 TCHHL1Q5QJ38 904 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 VWA5B1Q5TIE3 1220 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 ICE2Q659A1 982 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 GRHL2Q6ISB3 625 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 ZCCHC8Q6NZY4 707 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 EPGNQ6UW88 154 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 NXPE4Q6UWF7 544 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 C17orf64Q86WR6 236 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 METTL6Q8TCB7 284 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 TWIST2Q8WVJ9 160 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 PTCD3Q96EY7 689 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 SEC16BQ96JE7 1060 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 MAGEB10Q96LZ2 347 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 EBF4Q9BQW3 602 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 DUSP23Q9BVJ7 150 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 NUF2Q9BZD4 464 aa16.3■□□□□ 0.2
TSPAN4-205ENST00000397406 GOLGA4Q13439 2230 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 PIPSLA2A3N6 862 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 ISM1B1AKI9 464 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 ALPPL2P10696 532 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 VARSP26640 1264 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 HMOX2P30519 316 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 HNF4AP41235 474 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 GRK6P43250 576 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 IDH3AP50213 366 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 HTR6P50406 440 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 ARFIP2P53365 341 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 KIR2DS3Q14952 304 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 CPSF6Q16630 551 aaKnown RBP eCLIP16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 SLC9B1Q4ZJI4 515 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 RNF165Q6ZSG1 346 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 EFL1Q7Z2Z2 1120 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 ZNF438Q7Z4V0 828 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 FAM129CQ86XR2 697 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 MYLK4Q86YV6 388 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 ABHD11Q8NFV4 315 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 OR2L3Q8NG85 312 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 STON2Q8WXE9 905 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 MAELQ96JY0 434 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 MEAF6Q9HAF1 191 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 PELI2Q9HAT8 420 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 CUEDC1Q9NWM3 386 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 RALYQ9UKM9 306 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 RNF215Q9Y6U7 377 aa16.29■□□□□ 0.2
TSPAN4-205ENST00000397406 IGKV1-8A0A0C4DH67 115 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 OR5K3A6NET4 321 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 TRPC5OSA6NMA1 111 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 SDHDO14521 159 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 FFAR3O14843 346 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 HGSO14964 777 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 PIP5K1BO14986 540 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 GPR42O15529 346 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 NUDT21O43809 227 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 RRP9O43818 475 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 CHEK2O96017 543 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 POLR2CP19387 275 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 CLDN6P56747 220 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 ABATP80404 500 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 SUZ12Q15022 739 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 ZRSR2Q15696 482 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 OR4K1Q8NGD4 311 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 OR10G6Q8NH81 332 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 RSC1A1Q92681 617 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 USP7Q93009 1102 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 SLC22A18Q96BI1 424 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 OR2A14Q96R47 310 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 CDC6Q99741 560 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 EFCAB11Q9BUY7 163 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 SPNS1Q9H2V7 528 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 SLC6A20Q9NP91 592 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 GEMIN8Q9NWZ8 242 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 ACTR10Q9NZ32 417 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 BTRCQ9Y297 605 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 ARL2BPQ9Y2Y0 163 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 ENTPD2Q9Y5L3 495 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 PTGDR2Q9Y5Y4 395 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 MDC1Q14676 2089 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 LY6G6EA0A0G2JKS1 128 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms