RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 CD163Q86VB7 1156 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 TAX1BP1Q86VP1 789 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 CCDC71Q8IV32 467 aaPredicted RBP8.92□□□□□ -0.98
NEDD9-203ENST00000397378 RCOR2Q8IZ40 523 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 MARVELD2Q8N4S9 558 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 C2orf73Q8N5S3 287 aaPredicted RBP8.92□□□□□ -0.98
NEDD9-203ENST00000397378 CPSF7Q8N684 471 aaKnown RBP8.92□□□□□ -0.98
NEDD9-203ENST00000397378 SIMC1Q8NDZ2 872 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 MYRIPQ8NFW9 859 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 RND1Q92730 232 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 LRRC45Q96CN5 670 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 HAUS1Q96CS2 278 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 COX4I2Q96KJ9 171 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 IMMP1LQ96LU5 166 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 C10orf90Q96M02 699 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 TGIF2Q9GZN2 237 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 ZC3H7BQ9UGR2 993 aaKnown RBP8.92□□□□□ -0.98
NEDD9-203ENST00000397378 CDC14AQ9UNH5 594 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 L3MBTL1Q9Y468 752 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.92□□□□□ -0.98
NEDD9-203ENST00000397378 SCN3AQ9NY46 2000 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 ZNF407Q9C0G0 2248 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 LOC105369274A0A096LPK9 316 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 LOC102723532A0A0G2JNH3 316 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 ASPDHA6ND91 283 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 RCCD1A6NED2 376 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 H7C1Q1 480 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 AKR1B10O60218 316 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 ATE1O95260 518 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 HEXBP07686 556 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 MSNP26038 577 aaKnown RBP8.91□□□□□ -0.98
NEDD9-203ENST00000397378 CCR7P32248 378 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 FOXN2P32314 431 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 SLC26A3P40879 764 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 SHEQ5VZ18 495 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 KCTD11Q693B1 232 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 H3F3CQ6NXT2 135 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 KRTAP1-3Q8IUG1 177 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 VRK3Q8IV63 474 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 KATNAL2Q8IYT4 538 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 OR4N4Q8N0Y3 316 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 CIARTQ8N365 385 aaPredicted RBP8.91□□□□□ -0.98
NEDD9-203ENST00000397378 ARMC2Q8NEN0 867 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 HMGCLL1Q8TB92 370 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 ASZ1Q8WWH4 475 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 SPATA13Q96N96 652 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 FRMD6Q96NE9 622 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 IL17FQ96PD4 163 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 TRIM51Q9BSJ1 452 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 TUBB6Q9BUF5 446 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 HES7Q9BYE0 225 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 C10orf88Q9H8K7 445 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 MKKSQ9NPJ1 570 aaPredicted RBP8.91□□□□□ -0.98
NEDD9-203ENST00000397378 IMPACTQ9P2X3 320 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 TRPC4Q9UBN4 977 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 SLC39A10Q9ULF5 831 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 ASB1Q9Y576 335 aa8.91□□□□□ -0.98
NEDD9-203ENST00000397378 MXRA5Q9NR99 2828 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 HIVEP2P31629 2446 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 A0A0J9YVX5 310 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 OR2A25A4D2G3 310 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 MROH6A6NGR9 719 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 STK10O94804 968 aaKnown RBP8.9□□□□□ -0.98
NEDD9-203ENST00000397378 MBD3O95983 291 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 ERVK-10P10266 1014 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 CSE1LP55060 971 aaKnown RBP8.9□□□□□ -0.98
NEDD9-203ENST00000397378 HADHBP55084 474 aaKnown RBP8.9□□□□□ -0.98
NEDD9-203ENST00000397378 HSPA14Q0VDF9 509 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 SNTB1Q13884 538 aaKnown RBP8.9□□□□□ -0.98
NEDD9-203ENST00000397378 SPARCL1Q14515 664 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 NAA25Q14CX7 972 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 PCBP2Q15366 365 aaKnown RBP eCLIP8.9□□□□□ -0.987e-6■□□□□ 9.5
NEDD9-203ENST00000397378 GARNL3Q5VVW2 1013 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 PLAG1Q6DJT9 500 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 HMBOX1Q6NT76 420 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 ARSKQ6UWY0 536 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 CCDC50Q8IVM0 306 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 CDKL3Q8IVW4 592 aaPredicted RBP8.9□□□□□ -0.98
NEDD9-203ENST00000397378 CHERPQ8IWX8 916 aaKnown RBP8.9□□□□□ -0.98
NEDD9-203ENST00000397378 AMER3Q8N944 861 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 FAM98AQ8NCA5 519 aaKnown RBP8.9□□□□□ -0.98
NEDD9-203ENST00000397378 MDS2Q8NDY4 140 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 OR2L3Q8NG85 312 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 OR2A1Q8NGT9 310 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 CFAP61Q8NHU2 1237 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 ACTL9Q8TC94 416 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 TMEM158Q8WZ71 300 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 RAD51AP1Q96B01 352 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 SCMH1Q96GD3 660 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 CABS1Q96KC9 395 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 ZNF354BQ96LW1 612 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 ALS2CR12Q96Q35 445 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 DNAJC7Q99615 494 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 ZFYVE21Q9BQ24 234 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 CARD6Q9BX69 1037 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 CIDEBQ9UHD4 219 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 INTUQ9ULD6 942 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 MKL2Q9ULH7 1088 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 ALG6Q9Y672 507 aa8.9□□□□□ -0.98
NEDD9-203ENST00000397378 CHD3Q12873 2000 aaKnown RBP8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms