RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 IPPKQ9H8X2 491 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 DNAJC11Q9NVH1 559 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 SCHIP1Q9P0W5 487 aaPredicted RBP12.79□□□□□ -0.36
SEC13-209ENST00000397117 SPASTQ9UBP0 616 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 ZDHHC2Q9UIJ5 367 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 HAO1Q9UJM8 370 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 DCTN4Q9UJW0 460 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 PLAGL1Q9UM63 463 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 DOLKQ9UPQ8 538 aa12.79□□□□□ -0.36
SEC13-209ENST00000397117 CCDC187A0A096LP49 1063 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 A0A0G2JND7 137 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 OR5K4A6NMS3 321 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 SLCO1B7G3V0H7 640 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 NTN3O00634 580 aaPredicted RBP12.78□□□□□ -0.36
SEC13-209ENST00000397117 UBFD1O14562 309 aaKnown RBP12.78□□□□□ -0.36
SEC13-209ENST00000397117 EML2O95834 649 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 PKNOX1P55347 436 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 SH3BP2P78314 561 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 ARHGAP19Q14CB8 494 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 CAPN13Q6MZZ7 669 aaPredicted RBP12.78□□□□□ -0.36
SEC13-209ENST00000397117 GPRIN3Q6ZVF9 776 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 ANKS4BQ8N8V4 417 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 PPFIBP2Q8ND30 876 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 OR56A3Q8NH54 315 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 WDR48Q8TAF3 677 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 AGAP11Q8TF27 550 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 SEC16BQ96JE7 1060 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 CCNL2Q96S94 520 aaPredicted RBP12.78□□□□□ -0.36
SEC13-209ENST00000397117 ZNF382Q96SR6 550 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 ZBTB26Q9HCK0 441 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 ABCF3Q9NUQ8 709 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 SPATA7Q9P0W8 599 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 VTI1BQ9UEU0 232 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 SLC22A14Q9Y267 594 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 FIS1Q9Y3D6 152 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 TRAF6Q9Y4K3 522 aa12.78□□□□□ -0.36
SEC13-209ENST00000397117 TRBV23OR9-2A0A075B6M9 112 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 A6NCN8 305 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 LMO7DNF2Z398 122 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 PPP6CO00743 305 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 ESRRBO95718 433 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 CELA2BP08218 269 aaPredicted RBP12.77□□□□□ -0.36
SEC13-209ENST00000397117 CCND1P24385 295 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 ARFIP2P53365 341 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 AQP5P55064 265 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 LINC00303Q3SY05 128 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 IYDQ6PHW0 289 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 FOXR1Q6PIV2 292 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 THOC6Q86W42 341 aaKnown RBP12.77□□□□□ -0.36
SEC13-209ENST00000397117 CACNA2D3Q8IZS8 1091 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 CCDC197Q8NCU1 140 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 FAM46DQ8NEK8 389 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 RFWD2Q8NHY2 731 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 NAT6Q93015 286 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 IL17FQ96PD4 163 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 RAB11FIP5Q9BXF6 653 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 CCDC177Q9NQR7 707 aaPredicted RBP12.77□□□□□ -0.36
SEC13-209ENST00000397117 ATXN7L1Q9ULK2 861 aaPredicted RBP12.77□□□□□ -0.36
SEC13-209ENST00000397117 USH1CQ9Y6N9 552 aa12.77□□□□□ -0.36
SEC13-209ENST00000397117 UBR5O95071 2799 aaPredicted RBP12.77□□□□□ -0.36
SEC13-209ENST00000397117 ZFC3H1O60293 1989 aaKnown RBP12.77□□□□□ -0.37
SEC13-209ENST00000397117 KIR2DS5A0A0G2JLQ3 304 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 A0A0G2JNG1 304 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 KIR2DS3K7RE56 304 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 AZIN1O14977 448 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 HDAC3O15379 428 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 YY2O15391 372 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 NOBOXO60393 691 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 RAB28P51157 221 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 TBPL1P62380 186 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 CDC16Q13042 620 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 GRB7Q14451 532 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 KIR2DS5Q14953 304 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 CYP2A13Q16696 494 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 ZXDCQ2QGD7 858 aaPredicted RBP12.77□□□□□ -0.37
SEC13-209ENST00000397117 C6orf132Q5T0Z8 1188 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 THEMIS2Q5TEJ8 643 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 MILR1Q7Z6M3 343 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 SYVN1Q86TM6 617 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 KLHDC8AQ8IYD2 350 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 CLYBLQ8N0X4 340 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 SDR16C5Q8N3Y7 309 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 OR52B6Q8NGF0 335 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 ZDHHC1Q8WTX9 485 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 SH3KBP1Q96B97 665 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 LIN37Q96GY3 246 aaPredicted RBP12.77□□□□□ -0.37
SEC13-209ENST00000397117 CCDC3Q9BQI4 270 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 KIR3DX1Q9H7L2 352 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 ACTR8Q9H981 624 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 INTS7Q9NVH2 962 aaKnown RBP12.77□□□□□ -0.37
SEC13-209ENST00000397117 KCNK4Q9NYG8 393 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 ZNF624Q9P2J8 865 aaPredicted RBP12.77□□□□□ -0.37
SEC13-209ENST00000397117 PADI4Q9UM07 663 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 ARL2BPQ9Y2Y0 163 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 PCDHGA7Q9Y5G6 932 aa12.77□□□□□ -0.37
SEC13-209ENST00000397117 LRP4O75096 1905 aa12.76□□□□□ -0.37
SEC13-209ENST00000397117 B4DGG1 531 aa12.76□□□□□ -0.37
SEC13-209ENST00000397117 TMEM233B4DJY2 109 aa12.76□□□□□ -0.37
SEC13-209ENST00000397117 E7ENX8 843 aa12.76□□□□□ -0.37
SEC13-209ENST00000397117 MATN2O00339 956 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms