RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 FABP3P05413 133 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 C1SP09871 688 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 GPX2P18283 190 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 RPS3P23396 243 aaKnown RBP eCLIP13.49□□□□□ -0.25
NUP98-204ENST00000397004 GRK3P35626 688 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 MTAPQ13126 283 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 IRF3Q14653 427 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 GLB1LQ6UWU2 654 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 CBLL1Q75N03 491 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 METTL4Q8N3J2 472 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 TMEM132CQ8N3T6 1108 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 SETD9Q8NE22 299 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 ALG14Q96F25 216 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 TXNDC15Q96J42 360 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 HRASLS5Q96KN8 279 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 SPATA17Q96L03 361 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 GPATCH2Q9NW75 528 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 FKBP14Q9NWM8 211 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 PSORS1C1Q9UIG5 152 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 PCDHB1Q9Y5F3 818 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 ORC6Q9Y5N6 252 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 HSPE1-MOB4S4R3N1 261 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 CLDN11O75508 207 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 DBTP11182 482 aaKnown RBP13.49□□□□□ -0.25
NUP98-204ENST00000397004 AMD1P17707 334 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 HNF1BP35680 557 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 PPP3CCP48454 512 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 MAD2L1Q13257 205 aaPredicted RBP13.49□□□□□ -0.25
NUP98-204ENST00000397004 IFNL1Q8IU54 200 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 GPR26Q8NDV2 337 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 SELENOMQ8WWX9 145 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 ITPAQ9BY32 194 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 KLHL3Q9UH77 587 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 NOX1Q9Y5S8 564 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 ZNF840PA6NDX5 716 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 TLL1O43897 1013 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 AIREO43918 545 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 S100BP04271 92 aaPredicted RBP13.49□□□□□ -0.25
NUP98-204ENST00000397004 GABRB1P18505 474 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 ATP5C1P36542 298 aaKnown RBP13.49□□□□□ -0.25
NUP98-204ENST00000397004 GPR17Q13304 367 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 PLEKHG6Q3KR16 790 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 CCSAPQ6IQ19 270 aaPredicted RBP13.49□□□□□ -0.25
NUP98-204ENST00000397004 GALNT13Q8IUC8 556 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 ATG16L2Q8NAA4 619 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 C6orf62Q9GZU0 229 aaPredicted RBP13.49□□□□□ -0.25
NUP98-204ENST00000397004 MARCH7Q9H992 704 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 ZNF226Q9NYT6 803 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 DNMT3LQ9UJW3 386 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 TMPRSS11EQ9UL52 423 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 SAMD4AQ9UPU9 718 aaKnown RBP13.49□□□□□ -0.25
NUP98-204ENST00000397004 KMOO15229 486 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 ZNF821O75541 412 aaPredicted RBP13.48□□□□□ -0.25
NUP98-204ENST00000397004 ZNF157P51786 506 aaPredicted RBP13.48□□□□□ -0.25
NUP98-204ENST00000397004 STK40Q8N2I9 435 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 PGBD3Q8N328 593 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 POC5Q8NA72 575 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 CEP295NLQ96MC4 621 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 NIPSNAP1Q9BPW8 284 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 SCN3BQ9NY72 215 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 CLEC4EQ9ULY5 219 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 UNC80Q8N2C7 3258 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 ETHE1O95571 254 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 STSP08842 583 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 LAMP1P11279 417 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 ITGA1P56199 1179 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 CYP27C1Q4G0S4 372 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 NXNL2Q5VZ03 156 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 SLC46A3Q7Z3Q1 461 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 APCDD1Q8J025 514 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 DNAJC22Q8N4W6 341 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 SLC22A12Q96S37 553 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 COPS4Q9BT78 406 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 SP140LQ9H930 580 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 LATS2Q9NRM7 1088 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.48□□□□□ -0.25
NUP98-204ENST00000397004 ZNF7P17097 686 aaPredicted RBP13.48□□□□□ -0.25
NUP98-204ENST00000397004 AOAHP28039 575 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 ZNF177Q13360 481 aaPredicted RBP13.48□□□□□ -0.25
NUP98-204ENST00000397004 GAB1Q13480 694 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 NOXRED1Q6NXP6 359 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 PLD3Q8IV08 490 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 SYNPOQ8N3V7 929 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 SVOPQ8N4V2 548 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 ATL1Q8WXF7 558 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 FOXJ1Q92949 421 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 ULK4Q96C45 1275 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 TPD52L3Q96J77 140 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 FEVQ99581 238 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 CPNE5Q9HCH3 593 aa13.48□□□□□ -0.25
NUP98-204ENST00000397004 AFF4Q9UHB7 1163 aaKnown RBP13.48□□□□□ -0.25
NUP98-204ENST00000397004 FPGTO14772 594 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 HMGA1P17096 107 aaKnown RBP13.47□□□□□ -0.25
NUP98-204ENST00000397004 DGKAP23743 735 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 CASP3P42574 277 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 RPIAP49247 311 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 ZNF852Q6ZMS4 543 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 RBFAQ8N0V3 343 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 CYP4Z2PQ8N1L4 340 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 TP63Q9H3D4 680 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms