RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 TEDDM1Q5T9Z0 273 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 GARNL3Q5VVW2 1013 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 PRAMEF13Q5VWM6 474 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 ZNF425Q6IV72 752 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 COX15Q7KZN9 410 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 CPT1CQ8TCG5 803 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 ALKBH8Q96BT7 664 aaKnown RBP13.11□□□□□ -0.31
CXCL12-205ENST00000395794 KRT12Q99456 494 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 TRIM51Q9BSJ1 452 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 CRB3Q9BUF7 120 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 MFRPQ9BY79 579 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 ZFATQ9P243 1243 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 STOX2Q9P2F5 926 aaPredicted RBP13.11□□□□□ -0.31
CXCL12-205ENST00000395794 MAP10Q9P2G4 905 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 FBXL4Q9UKA2 621 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 VPS4AQ9UN37 437 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 VWA7Q9Y334 891 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 TEX264Q9Y6I9 313 aa13.11□□□□□ -0.31
CXCL12-205ENST00000395794 IGKV1-8A0A0C4DH67 115 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 VSTM2BA6NLU5 285 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 H7BY64 318 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 ZGLP1P0C6A0 271 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 GABRB3P28472 473 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 GRK3P35626 688 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 CDKN2DP55273 166 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 TBPL1P62380 186 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 PDIA2Q13087 525 aaKnown RBP13.1□□□□□ -0.31
CXCL12-205ENST00000395794 CALCOCO2Q13137 446 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 RBM20Q5T481 1227 aaKnown RBP13.1□□□□□ -0.31
CXCL12-205ENST00000395794 HECTD2Q5U5R9 776 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 FAM45BPQ6NSW5 357 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 JMJD6Q6NYC1 403 aaPredicted RBP13.1□□□□□ -0.31
CXCL12-205ENST00000395794 AGTRAPQ6RW13 159 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 C17orf64Q86WR6 236 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 ANKMY2Q8IV38 441 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 FAM45AQ8TCE6 357 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 STT3BQ8TCJ2 826 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 MARVELD3Q96A59 401 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 MIB2Q96AX9 1013 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 MMABQ96EY8 250 aaPredicted RBP13.1□□□□□ -0.31
CXCL12-205ENST00000395794 PWWP2AQ96N64 755 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 PRAP1Q96NZ9 151 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 OR2A5Q96R48 311 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 SPSB2Q99619 263 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 TMEM184CQ9NVA4 438 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 ARL15Q9NXU5 204 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 TRPC4Q9UBN4 977 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 ADAMTS6Q9UKP5 1117 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 PDE10AQ9Y233 779 aa13.1□□□□□ -0.31
CXCL12-205ENST00000395794 RUVBL1Q9Y265 456 aaKnown RBP13.1□□□□□ -0.31
CXCL12-205ENST00000395794 SPTBP11277 2137 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 HAT1O14929 419 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 CXCR2P25025 360 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 AVPR1BP47901 424 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 AP1S2P56377 157 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 SOX8P57073 446 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 RPS15AP62244 130 aaKnown RBP13.09□□□□□ -0.31
CXCL12-205ENST00000395794 KLC1Q07866 573 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 MGAT5Q09328 741 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 ILF2Q12905 390 aaKnown RBP13.09□□□□□ -0.31
CXCL12-205ENST00000395794 NAE1Q13564 534 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 DSG2Q14126 1118 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 FRG1Q14331 258 aaKnown RBP13.09□□□□□ -0.31
CXCL12-205ENST00000395794 HKDC1Q2TB90 917 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 TUBB8Q3ZCM7 444 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 STEAP4Q687X5 459 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 CAPN13Q6MZZ7 669 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-205ENST00000395794 MAATS1Q7Z4T9 603 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 LRRC56Q8IYG6 542 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-205ENST00000395794 PRSS58Q8IYP2 241 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 ZADH2Q8N4Q0 377 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 FBXO36Q8NEA4 188 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 ATL1Q8WXF7 558 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 PNPLA2Q96AD5 504 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 C10orf90Q96M02 699 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 HAUS8Q9BT25 410 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 DRC3Q9H069 523 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 CUEDC1Q9NWM3 386 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-205ENST00000395794 C3orf18Q9UK00 162 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 SNX24Q9Y343 169 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 HS3ST3B1Q9Y662 390 aa13.09□□□□□ -0.31
CXCL12-205ENST00000395794 UBR5O95071 2799 aaPredicted RBP13.08□□□□□ -0.32
CXCL12-205ENST00000395794 SOCS6O14544 535 aa13.08□□□□□ -0.32
CXCL12-205ENST00000395794 MAP2K7O14733 419 aa13.08□□□□□ -0.32
CXCL12-205ENST00000395794 MED26O95402 600 aa13.08□□□□□ -0.32
CXCL12-205ENST00000395794 HEXBP07686 556 aa13.08□□□□□ -0.32
CXCL12-205ENST00000395794 ACPPP15309 386 aa13.08□□□□□ -0.32
CXCL12-205ENST00000395794 SAT1P21673 171 aa13.08□□□□□ -0.32
CXCL12-205ENST00000395794 CASQ1P31415 396 aa13.08□□□□□ -0.32
CXCL12-205ENST00000395794 CD97P48960 835 aa13.08□□□□□ -0.32
CXCL12-205ENST00000395794 EMP2P54851 167 aa13.08□□□□□ -0.32
CXCL12-205ENST00000395794 TIAL1Q01085 375 aaKnown RBP eCLIP13.08□□□□□ -0.32
CXCL12-205ENST00000395794 AGAP7PQ5VUJ5 663 aa13.08□□□□□ -0.32
CXCL12-205ENST00000395794 SLC6A19Q695T7 634 aa13.08□□□□□ -0.32
CXCL12-205ENST00000395794 TRMT10BQ6PF06 316 aaKnown RBP13.08□□□□□ -0.32
CXCL12-205ENST00000395794 KIRREL2Q6UWL6 708 aa13.08□□□□□ -0.32
CXCL12-205ENST00000395794 STRA8Q7Z7C7 330 aa13.08□□□□□ -0.32
CXCL12-205ENST00000395794 PLD3Q8IV08 490 aa13.08□□□□□ -0.32
CXCL12-205ENST00000395794 ZBED8Q8IZ13 594 aa13.08□□□□□ -0.32
CXCL12-205ENST00000395794 DTWD1Q8N5C7 304 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms