RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 CD6P30203 668 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 GGT2P36268 569 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 MAGEA10P43363 369 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 MAPK9P45984 424 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 LSM3P62310 102 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 PPP1R8Q12972 351 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 CDH18Q13634 790 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 PLEKHS1Q5SXH7 462 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 TMEM236Q5W0B7 351 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 OR4F3Q6IEY1 312 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 LINGO4Q6UY18 593 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 ZNF621Q6ZSS3 439 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 AHSA2Q719I0 299 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 CEP68Q76N32 757 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 C16orf59Q7L2K0 433 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 BTLAQ7Z6A9 289 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 ZSWIM9Q86XI8 627 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 DENND6BQ8NEG7 585 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 LKAAEAR1Q8TD35 194 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 CHAC2Q8WUX2 184 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 MTFMTQ96DP5 389 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 COL21A1Q96P44 957 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 SMIM14Q96QK8 99 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 LYSMD1Q96S90 227 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 BOCQ9BWV1 1114 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 IL26Q9NPH9 171 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 PSORS1C1Q9UIG5 152 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 PCDHB11Q9Y5F2 797 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 A0A1W2PQ67 120 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 E9PQ18 207 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 LOC110117498-PIK3R3F6TDL0 507 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 hCG_2039718K7EN88 272 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 NUAK1O60285 661 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 TSPAN3O60637 253 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 SNX4O95219 450 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 GJB5O95377 273 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 CD160O95971 181 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 SRPRAP08240 638 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 CDKN2CP42773 168 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 SLC6A12P48065 614 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 PNLIPRP1P54315 467 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 GBX1Q14549 363 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 VEPH1Q14D04 833 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 CHRNA6Q15825 494 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 TIGD6Q17RP2 521 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 DEPDC1Q5TB30 811 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 ANKRD34AQ69YU3 496 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 ZNF605Q86T29 641 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 RTN4RL1Q86UN2 441 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 ANKRD46Q86W74 232 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 NUDT8Q8WV74 236 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 ATL1Q8WXF7 558 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 PIK3R3Q92569 461 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 CXorf40BQ96DE9 158 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 ASIC4Q96FT7 647 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 TRMT2BQ96GJ1 504 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 APOLD1Q96LR9 279 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 KLF16Q9BXK1 252 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 REXO4Q9GZR2 422 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 NXF2Q9GZY0 626 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 RACGAP1Q9H0H5 632 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 CRISPLD1Q9H336 500 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 ZNF556Q9HAH1 456 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 TMEM165Q9HC07 324 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 SLC6A13Q9NSD5 602 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 GPRC5BQ9NZH0 403 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 SPASTQ9UBP0 616 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 VPS51Q9UID3 782 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 LRFN2Q9ULH4 789 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 PPT2Q9UMR5 302 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 TESMINQ9Y4I5 508 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 PRSS21Q9Y6M0 314 aa9.74□□□□□ -0.85
UBE2D3-208ENST00000394803 CLCA1A8K7I4 914 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 QSOX1O00391 747 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 MAN1A2O60476 641 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 VNN2O95498 520 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 IFNA14P01570 189 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 KLKB1P03952 638 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 CDK1P06493 297 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 PABPC1P11940 636 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 BPIP17213 487 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 ALDH4A1P30038 563 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 HOXA9P31269 272 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 PCGF2P35227 344 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 GSSP48637 474 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 ALDH9A1P49189 494 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 VLDLRP98155 873 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 DNASE1L3Q13609 305 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 SLC8B1Q6J4K2 584 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 USP45Q70EL2 814 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 RNF180Q86T96 592 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 LYSMD2Q8IV50 215 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 ENTHD1Q8IYW4 607 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 SYNPOQ8N3V7 929 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 CLDN19Q8N6F1 224 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 POC5Q8NA72 575 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 C11orf65Q8NCR3 313 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 EID2BQ96D98 161 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 RAD9AQ99638 391 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 DOHHQ9BU89 302 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms