RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 CAPN13Q6MZZ7 669 aaPredicted RBP12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 GPR153Q6NV75 609 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 SUSD1Q6UWL2 747 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 MOB2Q70IA6 237 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 RRM2BQ7LG56 351 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 OR11H7Q8NGC8 314 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 COQ8AQ8NI60 647 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 TWIST2Q8WVJ9 160 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 COQ10AQ96MF6 247 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 CGRRF1Q99675 332 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 CMSS1Q9BQ75 279 aaKnown RBP12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 CRB3Q9BUF7 120 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 CINPQ9BW66 212 aaPredicted RBP12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 MED28Q9H204 178 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 CMAHPQ9Y471 501 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 A0A0G2JPF8 293 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 FAM95CA0A1B0GW59 222 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 A0A1W2PQL4 384 aaPredicted RBP12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 LCHNA4D1U4 455 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 HNRNPCL3B7ZW38 293 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 LZTS3O60299 673 aaPredicted RBP12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 BEST1O76090 585 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 LY86O95711 162 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 HNRNPCL4P0DMR1 293 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 RAB3BP20337 219 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 GPD1P21695 349 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 NOVP48745 357 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 RFX4Q33E94 735 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 CARD16Q5EG05 197 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 TRIQKQ629K1 86 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 LRRC66Q68CR7 880 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 KDM4DQ6B0I6 523 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 EIF3MQ7L2H7 374 aaKnown RBP12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 ADHFE1Q8IWW8 467 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 ENTHD1Q8IYW4 607 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 GPR156Q8NFN8 814 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 OR10A6Q8NH74 314 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 CA5BP1Q8WTZ4 195 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 RHBDF1Q96CC6 855 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 PABPC5Q96DU9 382 aaKnown RBP12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 QKIQ96PU8 341 aaKnown RBP eCLIP12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 WDR77Q9BQA1 342 aaPredicted RBP12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 MRPL45Q9BRJ2 306 aaKnown RBP12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 GSTO2Q9H4Y5 243 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 SRRDQ9UH36 339 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 TBX22Q9Y458 520 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 ZNF451Q9Y4E5 1061 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 ITGB4P16144 1822 aa12.18□□□□□ -0.46
SLC28A1-203ENST00000394573 A0A1B0GTL3 188 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 SIGLEC6O43699 453 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 APOL3O95236 402 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 KLK3P07288 261 aaPredicted RBP12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 ITGAMP11215 1152 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 CYP19A1P11511 503 aaPredicted RBP12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 PRKAR1BP31321 381 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 RAB13P51153 203 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 KIAA1024LP59773 190 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 EXOC3L2Q2M3D2 409 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 GLYR1Q49A26 553 aaPredicted RBP12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 SLFN12LQ6IEE8 588 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 ILDR2Q71H61 639 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 NLRC3Q7RTR2 1065 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 PID1Q7Z2X4 250 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 STX19Q8N4C7 294 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 TBC1D19Q8N5T2 526 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 LRRC17Q8N6Y2 441 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 EDARADDQ8WWZ3 215 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 NSUN5Q96P11 429 aaKnown RBP12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 GAS2L1Q99501 681 aaPredicted RBP12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 MIXL1Q9H2W2 232 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 MID1IP1Q9NPA3 183 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 PDLIM7Q9NR12 457 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 SDR39U1Q9NRG7 319 aaPredicted RBP12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 POLG2Q9UHN1 485 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 DERAQ9Y315 318 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 A0A1B0GV90 55 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 POM121BA6NF01 834 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 ISM1B1AKI9 464 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 PDCD5O14737 125 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 ORC5O43913 435 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 RLN2P04090 185 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 CNPP09543 421 aaKnown RBP12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 MAPTP10636 758 aaKnown RBP12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 CKMT1AP12532 417 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 EFNA1P20827 205 aaPredicted RBP12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 SOX3P41225 446 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 ATP4BP51164 291 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 ELP6Q0PNE2 266 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 MANEALQ5VSG8 457 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 SLC26A9Q7LBE3 791 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 PYROXD2Q8N2H3 581 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 LPCAT1Q8NF37 534 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 GANCQ8TET4 914 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 ASZ1Q8WWH4 475 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 GGHQ92820 318 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 TRIM43Q96BQ3 446 aaPredicted RBP12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 SIGLEC11Q96RL6 698 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 P2RY13Q9BPV8 354 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 TUBB1Q9H4B7 451 aa12.17□□□□□ -0.46
SLC28A1-203ENST00000394573 RAD18Q9NS91 495 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms