RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 VIPP01282 170 aa13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 CBSLP0DN79 551 aa13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 LAMP1P11279 417 aa13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 CBSP35520 551 aa13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 SLC6A12P48065 614 aa13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 WNT3P56703 355 aa13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 RPP38P78345 283 aaKnown RBP13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 IRF8Q02556 426 aa13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 KIAA1614Q5VZ46 1190 aa13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 ADNP2Q6IQ32 1131 aa13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 METTL2BQ6P1Q9 378 aaKnown RBP13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 BBS7Q8IWZ6 715 aa13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 MFSD4AQ8N468 514 aa13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 OR2AP1Q8NGE2 309 aa13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 FOXJ1Q92949 421 aa13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 ZDHHC6Q9H6R6 413 aa13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 NDRG4Q9ULP0 352 aaKnown RBP13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.51□□□□□ -0.25
GAPVD1-205ENST00000394084 SCN8AQ9UQD0 1980 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 SOCS5O75159 536 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 CD36P16671 472 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 SPOUT1Q5T280 376 aaKnown RBP13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 ZNF648Q5T619 568 aaPredicted RBP13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 SYT6Q5T7P8 510 aaPredicted RBP13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 TPRG1Q6ZUI0 275 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 CBARPQ8N350 705 aaPredicted RBP13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 DYNC2LI1Q8TCX1 351 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 ASB11Q8WXH4 323 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 VMP1Q96GC9 406 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 KCNC2Q96PR1 638 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 RUBCNLQ9H714 662 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 NECTIN3Q9NQS3 549 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 TMPRSS11EQ9UL52 423 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 BACE2Q9Y5Z0 518 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 ANAPC1Q9H1A4 1944 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 PCDHGA12O60330 932 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 CD22P20273 847 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 TNFRSF1BP20333 461 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 PRPS1L1P21108 318 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 SERPINB10P48595 397 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 GGTA1PQ4G0N0 100 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 XKR6Q5GH73 641 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 CATSPEREQ5SY80 951 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 PLD3Q8IV08 490 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 HS6ST3Q8IZP7 471 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 FAM9CQ8IZT9 166 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 L3MBTL4Q8NA19 623 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 OR6Q1Q8NGQ2 317 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 S100ZQ8WXG8 99 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 HERC2P3Q9BVR0 1158 aa13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 KIAA1522Q9P206 1035 aaPredicted RBP13.5□□□□□ -0.25
GAPVD1-205ENST00000394084 SCN2BO60939 215 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 WBP4O75554 376 aaKnown RBP13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 ARHGEF15O94989 841 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 CKMP06732 381 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 ABCB1P08183 1280 aaPredicted RBP13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 ACVR2AP27037 513 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 TRPC1P48995 793 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 PLEKHG6Q3KR16 790 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 ANGPTL8Q6UXH0 198 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 DSG4Q86SJ6 1040 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 DNASE1L2Q92874 299 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 LGALS12Q96DT0 336 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 TPT1P8Q9HAU6 139 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 SACM1LQ9NTJ5 587 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 TMED5Q9Y3A6 229 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 TRIM17Q9Y577 477 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 AGAP14A8MT82 685 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 ABLIM3O94929 683 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 OPN1SWP03999 348 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 C8GP07360 202 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 CCL23P55773 120 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 NPRL3Q12980 569 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 MTAPQ13126 283 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 CBLL1Q75N03 491 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 EIF3MQ7L2H7 374 aaKnown RBP13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 ELMOD1Q8N336 334 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 SVOPQ8N4V2 548 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 CSGALNACT1Q8TDX6 532 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 ELMO1Q92556 727 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 SCAMP4Q969E2 229 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 SCRN2Q96FV2 425 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 IGSF21Q96ID5 467 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 ATAD3AQ9NVI7 634 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 CFAP97Q9P2B7 532 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 FZD4Q9ULV1 537 aa13.49□□□□□ -0.25
GAPVD1-205ENST00000394084 C1SP09871 688 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 SRCP12931 536 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 GJA1P17302 382 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 GPX2P18283 190 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 CYP2A7P20853 494 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 MAPK8P45983 427 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 PFN3P60673 137 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 ABRQ12979 859 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 CAMK2GQ13555 558 aaPredicted RBP13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 HIST2H2ACQ16777 129 aaPredicted RBP13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 Q6ZNB5 142 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 USP45Q70EL2 814 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 DEFB128Q7Z7B8 93 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 TSPYL5Q86VY4 417 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms