RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 YBX1P67809 324 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 SARNPP82979 210 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 KLHL38Q2WGJ6 581 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 ICE2Q659A1 982 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 TMEM205Q6UW68 189 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 ZNF662Q6ZS27 426 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 CILP2Q8IUL8 1156 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 OTUD6BQ8N6M0 293 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 AMER3Q8N944 861 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 OR1N1Q8NGS0 311 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 NR4A3Q92570 626 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 RERGQ96A58 199 aaPredicted RBP16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 C8orf44Q96CB5 159 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 EBNA1BP2Q99848 306 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 MESP1Q9BRJ9 268 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 ACAT2Q9BWD1 397 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 DRC3Q9H069 523 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 ZNF700Q9H0M5 742 aa16.62■□□□□ 0.25
SNRPA1-202ENST00000394082 HEATR5BQ9P2D3 2071 aa16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 MAGEB16A2A368 324 aa16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 SLC16A8O95907 504 aa16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 ANXA5P08758 320 aa16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 MYBL2P10244 700 aa16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 CLCN7P51798 805 aa16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 PNLIPRP1P54315 467 aa16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 TTLL9Q3SXZ7 439 aa16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 ACSBG2Q5FVE4 666 aa16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 SUSD1Q6UWL2 747 aa16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 CENPUQ71F23 418 aa16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 GSTA5Q7RTV2 222 aa16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 PRSS58Q8IYP2 241 aa16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 BRIX1Q8TDN6 353 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 CRYL1Q9Y2S2 319 aa16.61■□□□□ 0.25
SNRPA1-202ENST00000394082 CROCCQ5TZA2 2017 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 SVILO95425 2214 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 E5RI56 91 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 E7ENX8 843 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 H0YIG0 161 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 GFYI3L273 518 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 FOXS1O43638 330 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 HEXBP07686 556 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 ENO3P13929 434 aaPredicted RBP16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 HRH2P25021 359 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 TAP2Q03519 686 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 NDUFA9Q16795 377 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 HKDC1Q2TB90 917 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 NEPROQ6NW34 567 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 REXO1L1PQ8IX06 675 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 DNAJB8Q8NHS0 232 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 ZNF480Q8WV37 535 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 ASB11Q8WXH4 323 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 KCNJ9Q92806 393 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 MMABQ96EY8 250 aaPredicted RBP16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 IMMP1LQ96LU5 166 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 TAAR6Q96RI8 345 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 PKP4Q99569 1192 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 TUBB6Q9BUF5 446 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 SYNPO2LQ9H987 977 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 ABI3Q9P2A4 366 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 PTGFRNQ9P2B2 879 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 STOX2Q9P2F5 926 aaPredicted RBP16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 GALPQ9UBC7 116 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 TAC3Q9UHF0 121 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 APCP25054 2843 aa16.6■□□□□ 0.25
SNRPA1-202ENST00000394082 CPAMD8Q8IZJ3 1885 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 KCNE1BA0A087WTH5 132 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 FAM237BA0A1B0GVD1 139 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 GOLGA8KD6RF30 607 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 GOLGA8TH3BQL2 631 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 ZG16O60844 167 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 WFS1O76024 890 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 CRYABP02511 175 aaKnown RBP16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 FGGP02679 453 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 MPC1LP0DKB6 136 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 MLNP12872 115 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 SKIV2L2P42285 1042 aaKnown RBP16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 KCNJ11Q14654 390 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 PCOLCEQ15113 449 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 CES3Q6UWW8 571 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 LMNTD2Q8IXW0 634 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 LRRC56Q8IYG6 542 aaPredicted RBP16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 PCDHGB6Q9Y5F9 930 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 COMMD10Q9Y6G5 202 aa16.59■□□□□ 0.25
SNRPA1-202ENST00000394082 TCRBV7S3A2A0A539 114 aa16.58■□□□□ 0.24
SNRPA1-202ENST00000394082 EIF3FO00303 357 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-202ENST00000394082 TNFRSF8P28908 595 aa16.58■□□□□ 0.24
SNRPA1-202ENST00000394082 ART3Q13508 389 aa16.58■□□□□ 0.24
SNRPA1-202ENST00000394082 PCGF5Q86SE9 256 aa16.58■□□□□ 0.24
SNRPA1-202ENST00000394082 ZC3H7AQ8IWR0 971 aaKnown RBP16.58■□□□□ 0.24
SNRPA1-202ENST00000394082 FAM129AQ9BZQ8 928 aa16.58■□□□□ 0.24
SNRPA1-202ENST00000394082 RUBCNLQ9H714 662 aa16.58■□□□□ 0.24
SNRPA1-202ENST00000394082 PCYOX1Q9UHG3 505 aa16.58■□□□□ 0.24
SNRPA1-202ENST00000394082 TEKT2Q9UIF3 430 aa16.58■□□□□ 0.24
SNRPA1-202ENST00000394082 MED16Q9Y2X0 877 aa16.58■□□□□ 0.24
SNRPA1-202ENST00000394082 KLF2Q9Y5W3 355 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-202ENST00000394082 CSMD1Q96PZ7 3565 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 A0A0A6YYC8 382 aaPredicted RBP16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 OR5H15A6NDH6 313 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms