RNA–Protein interactions for RNA: ENST00000390625.3

IGHV3-49-201, Transcript of immunoglobulin heavy variable 3-49, humanhuman

APPRIS P1 BASIC

Gene IGHV3-49, Length 439 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-49-201ENST00000390625 TPM4P67936 248 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 CRADDP78560 199 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 RBPJQ06330 500 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 CTSL3PQ5NE16 218 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 ACER2Q5QJU3 275 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 C11orf63Q6NUN7 778 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 RIPOR1Q6ZS17 1223 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 RPRMLQ8N4K4 120 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 CSNK1A1LQ8N752 337 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 OR9A4Q8NGU2 314 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 OR6P1Q8NGX9 317 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 OR4L1Q8NH43 312 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 ASZ1Q8WWH4 475 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 ATG4AQ8WYN0 398 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 SDCCAG3Q96C92 435 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 MAGED4Q96JG8 741 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 OR2A5Q96R48 311 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 TREX2Q9BQ50 279 aaPredicted RBP12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 UCK2Q9BZX2 261 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 P2RY12Q9H244 342 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 ABCF3Q9NUQ8 709 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 ZNHIT6Q9NWK9 470 aaKnown RBP12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 ASB1Q9Y576 335 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 PCDHGB6Q9Y5F9 930 aa12.93□□□□□ -0.34
IGHV3-49-201ENST00000390625 EML6Q6ZMW3 1958 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 NKX2-6A6NCS4 301 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 GOLGA6L19H0YKK7 550 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 QSOX1O00391 747 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 DNAJB6O75190 326 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 STK10O94804 968 aaKnown RBP12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 APOA4P06727 396 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 ERVK-10P10266 1014 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 FDXRP22570 491 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 PTGER1P34995 402 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 RFC3P40938 356 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 SMSP52788 366 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 ART1P52961 327 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 ALDH6A1Q02252 535 aaKnown RBP12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 PLOD1Q02809 727 aaPredicted RBP12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 ACVR1Q04771 509 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 TSTA3Q13630 321 aaPredicted RBP12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 OR1C1Q15619 314 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 BTBD16Q32M84 506 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 MTFR2Q6P444 385 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 AFTPHQ6ULP2 937 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 GALNTL5Q7Z4T8 443 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 ZNF227Q86WZ6 799 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 CHTF18Q8WVB6 975 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 SKA2Q8WVK7 121 aaPredicted RBP12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 RAD51AP1Q96B01 352 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 VPS50Q96JG6 964 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 SPOCK3Q9BQ16 436 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 PLCD4Q9BRC7 762 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 RBCK1Q9BYM8 510 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 GSX1Q9H4S2 264 aaPredicted RBP12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 PACSIN2Q9UNF0 486 aaPredicted RBP12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 PCDHA13Q9Y5I0 950 aa12.92□□□□□ -0.34
IGHV3-49-201ENST00000390625 ABCA4P78363 2273 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 ASPDHA6ND91 283 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 ARHGEF33A8MVX0 844 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 HAT1O14929 419 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 ASNA1O43681 348 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 NIPSNAP2O75323 286 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 C8orf89P0DMQ9 161 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 AGAP20933 346 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 PTPN7P35236 360 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 COPS2P61201 443 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 TBX2Q13207 712 aaPredicted RBP12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 ZNF425Q6IV72 752 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 H3F3CQ6NXT2 135 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 KIF2BQ8N4N8 673 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 CPSF7Q8N684 471 aaKnown RBP12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 SUN3Q8TAQ9 357 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 HMGCLL1Q8TB92 370 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 THAP3Q8WTV1 239 aaPredicted RBP12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 SCMH1Q96GD3 660 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 ALS2CR12Q96Q35 445 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 CYTH2Q99418 400 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 SLC30A3Q99726 388 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 TGIF2Q9GZN2 237 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 LIME1Q9H400 295 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 ETNK1Q9HBU6 452 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 MKKSQ9NPJ1 570 aaPredicted RBP12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 HCN3Q9P1Z3 774 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 TAC3Q9UHF0 121 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 PCYOX1Q9UHG3 505 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 SH2B3Q9UQQ2 575 aa12.91□□□□□ -0.34
IGHV3-49-201ENST00000390625 FLNAP21333 2647 aaKnown RBP12.9□□□□□ -0.34
IGHV3-49-201ENST00000390625 GOLGA8KD6RF30 607 aa12.9□□□□□ -0.34
IGHV3-49-201ENST00000390625 GOLGA8TH3BQL2 631 aa12.9□□□□□ -0.34
IGHV3-49-201ENST00000390625 TTI1O43156 1089 aa12.9□□□□□ -0.34
IGHV3-49-201ENST00000390625 KDM1AO60341 852 aa12.9□□□□□ -0.34
IGHV3-49-201ENST00000390625 NEURL1O76050 574 aa12.9□□□□□ -0.34
IGHV3-49-201ENST00000390625 CAPN3P20807 821 aa12.9□□□□□ -0.34
IGHV3-49-201ENST00000390625 CASP6P55212 293 aa12.9□□□□□ -0.34
IGHV3-49-201ENST00000390625 FASTKD1Q53R41 847 aaKnown RBP12.9□□□□□ -0.34
IGHV3-49-201ENST00000390625 ACSBG2Q5FVE4 666 aa12.9□□□□□ -0.34
IGHV3-49-201ENST00000390625 CES3Q6UWW8 571 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms