RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 CPZQ66K79 652 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 LCTLQ6UWM7 567 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 C3orf62Q6ZUJ4 267 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 CEP97Q8IW35 865 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 PALM2Q8IXS6 379 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 MMGT1Q8N4V1 131 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 DTWD1Q8N5C7 304 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 TTC29Q8NA56 475 aaPredicted RBP10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 OR4K1Q8NGD4 311 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 C9orf43Q8TAL5 461 aaPredicted RBP10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 ANKRD49Q8WVL7 239 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 NACC2Q96BF6 587 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 PTERQ96BW5 349 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 FBXL8Q96CD0 374 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 VPS39Q96JC1 886 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 SPSB2Q99619 263 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 GPR22Q99680 433 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 WDR54Q9H977 334 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 POPDC3Q9HBV1 291 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 LRRC4CQ9HCJ2 640 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 CCDC177Q9NQR7 707 aaPredicted RBP10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 IFT80Q9P2H3 777 aaPredicted RBP10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 SH2B3Q9UQQ2 575 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 PADI2Q9Y2J8 665 aa10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 MTO1Q9Y2Z2 717 aaKnown RBP10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 PTRH2Q9Y3E5 179 aaKnown RBP10.87□□□□□ -0.67
IGHV4-28-201ENST00000390612 MKRN2OSH3BPM6 223 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 H7BY64 318 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 HAT1O14929 419 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 DNAJB5O75953 348 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 PIM1P11309 404 aaPredicted RBP10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 CCND1P24385 295 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 OR1D4P47884 311 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 FOXL2P58012 376 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 CSNK1G2P78368 415 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 SLC7A5Q01650 507 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 POU4F1Q01851 419 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 ZNF460Q14592 562 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 SLC9A5Q14940 896 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 MUM1Q2TAK8 710 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 GARNL3Q5VVW2 1013 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 PRAMEF13Q5VWM6 474 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 PRMT9Q6P2P2 845 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 MED25Q71SY5 747 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 VN1R4Q7Z5H5 301 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 PPP1R32Q7Z5V6 425 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 MRGPREQ86SM8 312 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 NKAPQ8N5F7 415 aaKnown RBP10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 TMEM102Q8N9M5 508 aaPredicted RBP10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 ABHD11Q8NFV4 315 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 TM4SF19Q96DZ7 209 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 MVB12AQ96EY5 273 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 PRAP1Q96NZ9 151 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 IP6K3Q96PC2 410 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 OR4K3Q96R72 315 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 CPNE1Q99829 537 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 SARGQ9BW04 601 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 ATG10Q9H0Y0 220 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 ING2Q9H160 280 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 IRAK4Q9NWZ3 460 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 UTP6Q9NYH9 597 aaKnown RBP10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 NDOR1Q9UHB4 597 aa10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 GPN3Q9UHW5 284 aaPredicted RBP10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 RUVBL1Q9Y265 456 aaKnown RBP10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 PCDHGA9Q9Y5G4 932 aaKnown RBP10.86□□□□□ -0.67
IGHV4-28-201ENST00000390612 ASH1LQ9NR48 2969 aaKnown RBP10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 LRRK2Q5S007 2527 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 ESYT3A0FGR9 886 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 ARGFXA6NJG6 315 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 CDC7O00311 574 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 P2RX6O15547 441 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 FOXS1O43638 330 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 PDGFAP04085 211 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 HIST1H2AGP0C0S8 130 aaPredicted RBP10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 HIST1H2ADP20671 130 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 GP5P40197 560 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 SOX8P57073 446 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 SNRPNP63162 240 aaKnown RBP10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 CDKL1Q00532 357 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 CHAF1BQ13112 559 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 TSTA3Q13630 321 aaPredicted RBP10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 ATP1A4Q13733 1029 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 FAM53BQ14153 422 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 ZKSCAN8Q15776 578 aaPredicted RBP10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 HKDC1Q2TB90 917 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 LACTB2Q53H82 288 aaPredicted RBP10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 THEMIS2Q5TEJ8 643 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 C8orf74Q6P047 294 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 CAPN12Q6ZSI9 719 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 RAB43Q86YS6 212 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 RELL1Q8IUW5 271 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 PLD3Q8IV08 490 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 KLHDC8AQ8IYD2 350 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 CSNK1A1LQ8N752 337 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 NOA1Q8NC60 698 aaKnown RBP10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 CDKL2Q92772 493 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 THAP11Q96EK4 314 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 HIST1H2AHQ96KK5 128 aa10.85□□□□□ -0.67
IGHV4-28-201ENST00000390612 UBXN10Q96LJ8 280 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms