RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ANKRD34CP0C6C1 535 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 HLA-DPA1P20036 260 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 ITGA3P26006 1051 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 DCTP40126 519 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 MYL7Q01449 175 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 AKAP17AQ02040 695 aaKnown RBP4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 HERC3Q15034 1050 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 ZRSR1Q15695 479 aaKnown RBP4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 LRRC38Q5VT99 294 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 ARHGEF16Q5VV41 709 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 SLC35E4Q6ICL7 350 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 FAM166AQ6J272 317 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 CCDC83Q8IWF9 413 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 APCDD1Q8J025 514 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 KLHDC1Q8N7A1 406 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 NIPA2Q8N8Q9 360 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 CNBD1Q8NA66 436 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 KBTBD8Q8NFY9 601 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 SUSD6Q92537 303 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 KRT35Q92764 455 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 CCDC3Q9BQI4 270 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 DBNDD1Q9H9R9 158 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 ZNF556Q9HAH1 456 aa4.92□□□□□ -1.62
RNU6-40P-201ENST00000384254 IGHV4-61A0A0C4DH41 118 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 PRSS46E5RG02 174 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 NPIPA3F8WFD2 350 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 ZNF197O14709 1029 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 TTI1O43156 1089 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 RTN2O75298 545 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 PNPP00491 289 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 IGHV4-59P01825 116 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 SP9P0CG40 484 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 CYP2A7P20853 494 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 GLIPR1P48060 266 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 KHKP50053 298 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 ARF5P84085 180 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 ARL16Q0P5N6 197 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 SQLEQ14534 574 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 RBBP5Q15291 538 aaKnown RBP4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 CDC37Q16543 378 aaPredicted RBP4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 SUSD4Q5VX71 490 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 TMEM270Q6UE05 265 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 CEACAM20Q6UY09 585 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 SH2D5Q6ZV89 423 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 TRPT1Q86TN4 253 aaKnown RBP4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 KLHDC9Q8NEP7 349 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 LRRC8CQ8TDW0 803 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 CDKN2AIPNLQ96HQ2 116 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 CABS1Q96KC9 395 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 C4orf45Q96LM5 186 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 UHRF2Q96PU4 802 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 BTBD9Q96Q07 612 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 MMP28Q9H239 520 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 AKIRIN1Q9H9L7 192 aaPredicted RBP4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 RNPEPL1Q9HAU8 725 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 OR6C2Q9NZP2 312 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 STX8Q9UNK0 236 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 GPR132Q9UNW8 380 aa4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 MYH14Q7Z406 1995 aaKnown RBP4.91□□□□□ -1.62
RNU6-40P-201ENST00000384254 TRAV18A0A075B6X5 111 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 BMPR1BO00238 502 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 KCNAB3O43448 404 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 LMX1BO60663 402 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 GLRA3O75311 464 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 THEGLP0DJG4 465 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 NKX2-1P43699 371 aaPredicted RBP4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 CETN1Q12798 172 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 STPG1Q5TH74 334 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 ZNF771Q7L3S4 317 aaPredicted RBP4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 GPR141Q7Z602 305 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 PRSS35Q8N3Z0 413 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 LPCAT1Q8NF37 534 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 OR7A2PQ8NGA2 310 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 OR4C15Q8NGM1 316 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 OLIG1Q8TAK6 271 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 ATP6V0A1Q93050 837 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 AP2M1Q96CW1 435 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 SNRNP40Q96DI7 357 aaKnown RBP4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 TSSK2Q96PF2 358 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 C17orf62Q9BQA9 187 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 ACAT2Q9BWD1 397 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 IDI2Q9BXS1 227 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 UBQLN3Q9H347 655 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 CUEDC2Q9H467 287 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 RPF1Q9H9Y2 349 aaKnown RBP4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 RAB9BQ9NP90 201 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 MID1IP1Q9NPA3 183 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 KCNG2Q9UJ96 466 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 NOCTQ9UK39 431 aaKnown RBP4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 FBXW2Q9UKT8 454 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 ICAM5Q9UMF0 924 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 KCNJ14Q9UNX9 436 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 KNSTRNQ9Y448 316 aa4.9□□□□□ -1.63
RNU6-40P-201ENST00000384254 A0A0B4J203 849 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 EME2A4GXA9 379 aaPredicted RBP4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 FAM149AA5PLN7 773 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 SMIM1B2RUZ4 78 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 KLF11O14901 512 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 KERAO60938 352 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms