RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 CCDC36Q8IYA8 594 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 MINDY1Q8N5J2 469 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 OR56B2PQ8NGI1 322 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 OR13J1Q8NGT2 312 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 MSI2Q96DH6 328 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 TEFMQ96QE5 360 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 NUSAP1Q9BXS6 441 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 LHPPQ9H008 270 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 DCSTAMPQ9H295 470 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 APOBEC3GQ9HC16 384 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 YAE1D1Q9NRH1 226 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 CPNE7Q9UBL6 633 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 ZDHHC2Q9UIJ5 367 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 CLCA2Q9UQC9 943 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 GPR45Q9Y5Y3 372 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 KCNE2Q9Y6J6 123 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 CACNA1SQ13698 1873 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 ZNF785A8K8V0 405 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 TCP10L2B9ZVM9 353 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 SCELO95171 688 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 FADS2O95864 444 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 TMIGD3P0DMS9 266 aaPredicted RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 NR4A1P22736 598 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 YAP1P46937 504 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 GBX2P52951 348 aaPredicted RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 PLA2G16P53816 162 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 ARSFP54793 590 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 ABATP80404 500 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 PLAURQ03405 335 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 STXBP2Q15833 593 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 C6orf141Q5SZD1 244 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 SH2D5Q6ZV89 423 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 SPRED1Q7Z699 444 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 CDH26Q8IXH8 852 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 LRRC71Q8N4P6 559 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 OR6Q1Q8NGQ2 317 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 OLIG1Q8TAK6 271 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 DNAJB14Q8TBM8 379 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 CRYGNQ8WXF5 182 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 ZNF641Q96N77 438 aaPredicted RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 TECTBQ96PL2 329 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 TBL1YQ9BQ87 522 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 TMEM246Q9BRR3 403 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 ITPAQ9BY32 194 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 CD244Q9BZW8 370 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 OR10A4Q9H209 315 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 DSN1Q9H410 356 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 FKBP14Q9NWM8 211 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 HCFC1R1Q9NWW0 138 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 QPCTLQ9NXS2 382 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 TMEM181Q9P2C4 612 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 LAMP5Q9UJQ1 280 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 TSPAN16Q9UKR8 245 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 HEMK1Q9Y5R4 338 aaPredicted RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 LYVE1Q9Y5Y7 322 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 HSPE1-MOB4S4R3N1 261 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 MSCO60682 206 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 HUS1O60921 280 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 SLC22A3O75751 556 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 ALX3O95076 343 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 GLUD2P49448 558 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 LGALS3BPQ08380 585 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 TSNQ15631 228 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 HIST2H2ACQ16777 129 aaPredicted RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 BICRALQ6AI39 1079 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 PTRHD1Q6GMV3 140 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 OVOS1Q6IE37 1185 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 CCDC190Q86UF4 302 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 FAM35AQ86V20 835 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 NRROSQ86YC3 692 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 SKA3Q8IX90 412 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 FAM126BQ8IXS8 530 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 TIGD4Q8IY51 512 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 CADM3Q8N126 398 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 CHST14Q8NCH0 376 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 ANGPTL6Q8NI99 470 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 CNOT9Q92600 299 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 LRRC58Q96CX6 371 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 PHF21BQ96EK2 531 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 ASIC4Q96FT7 647 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 THOC3Q96J01 351 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 ZNF717Q9BY31 904 aaPredicted RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 FAM49AQ9H0Q0 323 aaPredicted RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 SLC6A15Q9H2J7 730 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 C12orf4Q9NQ89 552 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 PRDM8Q9NQV8 689 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 LYARQ9NX58 379 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 CFL2Q9Y281 166 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 KCNK7Q9Y2U2 307 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 TRPM3Q9HCF6 1732 aaPredicted RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 C2CD4BA6NLJ0 364 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 A8MX80 341 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 SDHDO14521 159 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 RSL1D1O76021 490 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 VNN1O95497 513 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 CYP11A1P05108 521 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 IL7P13232 177 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 HNRNPLP14866 589 aaKnown RBP eCLIP5.58□□□□□ -1.52
RFC1-202ENST00000381897 JUPP14923 745 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 YBX3P16989 372 aaKnown RBP eCLIP5.58□□□□□ -1.524e-6■■■□□ 16.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms