RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 HCRTR1O43613 425 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 KATNA1O75449 491 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 OR2B3O76000 313 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 GUCA1CO95843 209 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 ITGB2P05107 769 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 CTSBP07858 339 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 STMN1P16949 149 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 WT1P19544 449 aaPredicted RBP8.86□□□□□ -0.99
HMGN1-202ENST00000380747 DLSTP36957 453 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 GABRA4P48169 554 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 PSMA6P60900 246 aaKnown RBP8.86□□□□□ -0.99
HMGN1-202ENST00000380747 RAB10P61026 200 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 YBX1P67809 324 aaKnown RBP8.86□□□□□ -0.99
HMGN1-202ENST00000380747 NAA25Q14CX7 972 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 ZC3H12BQ5HYM0 836 aaKnown RBP8.86□□□□□ -0.99
HMGN1-202ENST00000380747 ICE2Q659A1 982 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 AGTRAPQ6RW13 159 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 RAPH1Q70E73 1250 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 FRA10AC1Q70Z53 315 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 PRICKLE2Q7Z3G6 844 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 ADCK2Q7Z695 626 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 RELL1Q8IUW5 271 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 MCATQ8IVS2 390 aaKnown RBP8.86□□□□□ -0.99
HMGN1-202ENST00000380747 UHMK1Q8TAS1 419 aaKnown RBP8.86□□□□□ -0.99
HMGN1-202ENST00000380747 ANKRD49Q8WVL7 239 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 MR1Q95460 341 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 ZUFSPQ96AP4 578 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 PDLIM5Q96HC4 596 aaKnown RBP8.86□□□□□ -0.99
HMGN1-202ENST00000380747 UNKQ9C0B0 810 aaKnown RBP8.86□□□□□ -0.99
HMGN1-202ENST00000380747 ATG10Q9H0Y0 220 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 ACTR5Q9H9F9 607 aaPredicted RBP8.86□□□□□ -0.99
HMGN1-202ENST00000380747 SLC6A20Q9NP91 592 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 CCDC177Q9NQR7 707 aaPredicted RBP8.86□□□□□ -0.99
HMGN1-202ENST00000380747 CTNNAL1Q9UBT7 734 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 CROTQ9UKG9 612 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 IKZF3Q9UKT9 509 aa8.86□□□□□ -0.99
HMGN1-202ENST00000380747 HEMK1Q9Y5R4 338 aaPredicted RBP8.86□□□□□ -0.99
HMGN1-202ENST00000380747 NBASA2RRP1 2371 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 A0A0J9YVX5 310 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 ZNF749O43361 778 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 NRP2O60462 931 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 AVPP01185 164 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 KLK3P07288 261 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-202ENST00000380747 ENO2P09104 434 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-202ENST00000380747 HBQ1P09105 142 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 MSL3P1P0C860 447 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 CCDC166P0CW27 439 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 SFTPCP11686 197 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 BMP2P12643 396 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 TCN2P20062 427 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 STAT5AP42229 794 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 PMS2P54278 862 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 AP1S2P56377 157 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 VSX2P58304 361 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-202ENST00000380747 TBPL1P62380 186 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 ABATP80404 500 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 PRDX1Q06830 199 aaKnown RBP8.85□□□□□ -0.99
HMGN1-202ENST00000380747 GPS2Q13227 327 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 NAE1Q13564 534 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 DNASE1L3Q13609 305 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 BMPR2Q13873 1038 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 TSNQ15631 228 aaKnown RBP8.85□□□□□ -0.99
HMGN1-202ENST00000380747 PTCHD3Q3KNS1 767 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 PRAMEF13Q5VWM6 474 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 FAM199XQ6PEV8 388 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-202ENST00000380747 SBSNQ6UWP8 590 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 ATG14Q6ZNE5 492 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 CMC1Q7Z7K0 106 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 GSPT2Q8IYD1 628 aaKnown RBP8.85□□□□□ -0.99
HMGN1-202ENST00000380747 LRRC56Q8IYG6 542 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-202ENST00000380747 SPATA6LQ8N4H0 392 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 ZNF655Q8N720 491 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-202ENST00000380747 EXD3Q8N9H8 876 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 ZSCAN1Q8NBB4 408 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 SLC38A9Q8NBW4 561 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 CT55Q8WUE5 264 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 ATL1Q8WXF7 558 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 FBXL8Q96CD0 374 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 EGFL8Q99944 293 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 SELENOSQ9BQE4 189 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 NDC1Q9BTX1 674 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 EFHD1Q9BUP0 239 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 DERL2Q9GZP9 239 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 ACSS3Q9H6R3 686 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 LHX9Q9NQ69 397 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 SNX7Q9UNH6 387 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 IKBKGQ9Y6K9 419 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 AP1M2Q9Y6Q5 423 aa8.85□□□□□ -0.99
HMGN1-202ENST00000380747 SPENQ96T58 3664 aaKnown RBP8.85□□□□□ -0.99
HMGN1-202ENST00000380747 A0A087WUV0 522 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 OR2A25A4D2G3 310 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 ZNF891A8MT65 544 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 POC1B-GALNT4F8VUJ3 575 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 ZSCAN9O15535 394 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 SUV39H1O43463 412 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 ZNF500O60304 480 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 CTSVO60911 334 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 EIF2S1P05198 315 aaKnown RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 INHBAP08476 426 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 FAM153BP0C7A2 387 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms