RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 EEPD1Q7L9B9 569 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 CASTOR1Q8WTX7 329 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 RHOJQ9H4E5 214 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 TEX10Q9NXF1 929 aaPredicted RBP8.54□□□□□ -1.04
LIG3-202ENST00000378526 EXTL2Q9UBQ6 330 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 GTF2IRD1Q9UHL9 959 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 PTPRKQ15262 1439 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 A0A0D9SG52 128 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 DCDC2BA2VCK2 349 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 ZNF670-ZNF695F2Z2N8 137 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 ERCC1P07992 297 aaPredicted RBP8.54□□□□□ -1.04
LIG3-202ENST00000378526 PKMP14618 531 aaKnown RBP8.54□□□□□ -1.04
LIG3-202ENST00000378526 CPN1P15169 458 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 TRIM61Q5EBN2 209 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 DPY19L2Q6NUT2 758 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 RFPL4BQ6ZWI9 263 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 GID4Q8IVV7 300 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 TRMT2AQ8IZ69 625 aaKnown RBP8.54□□□□□ -1.04
LIG3-202ENST00000378526 ABRAQ8N0Z2 381 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 ENDOVQ8N8Q3 282 aaKnown RBP8.54□□□□□ -1.04
LIG3-202ENST00000378526 NEIL3Q8TAT5 605 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 SETD7Q8WTS6 366 aaKnown RBP8.54□□□□□ -1.04
LIG3-202ENST00000378526 DNASE1L2Q92874 299 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 SPIN2AQ99865 258 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 SPIN2BQ9BPZ2 258 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 POLE4Q9NR33 117 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 DZANK1Q9NVP4 752 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 ARHGAP20Q9P2F6 1191 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 RALYQ9UKM9 306 aaKnown RBP8.54□□□□□ -1.04
LIG3-202ENST00000378526 PTCH2Q9Y6C5 1203 aa8.54□□□□□ -1.04
LIG3-202ENST00000378526 KIF13AQ9H1H9 1805 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 HRGP04196 525 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 ITGA5P08648 1049 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 GABRA2P47869 451 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 FXYD6P3P58550 94 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 ERVFC1P60507 584 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 SERINC3Q13530 473 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 LASP1Q14847 261 aaKnown RBP8.53□□□□□ -1.04
LIG3-202ENST00000378526 Q3ZCU0 254 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 CRB2Q5IJ48 1285 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 SLC2A7Q6PXP3 512 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 DBX2Q6ZNG2 339 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 FANK1Q8TC84 345 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 FAM84BQ96KN1 310 aaPredicted RBP8.53□□□□□ -1.04
LIG3-202ENST00000378526 FERD3LQ96RJ6 166 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 ULBP1Q9BZM6 244 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 KCNU1A8MYU2 1149 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 FFAR3O14843 346 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 GPR42O15529 346 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 EEF1E1O43324 174 aaKnown RBP8.53□□□□□ -1.04
LIG3-202ENST00000378526 RAD51DO75771 328 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 RPLP2P05387 115 aaKnown RBP8.53□□□□□ -1.04
LIG3-202ENST00000378526 PITPNBP48739 271 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 TNK1Q13470 666 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 MGAT5BQ3V5L5 792 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 FAM69AQ5T7M9 428 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 KCNT2Q6UVM3 1135 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 HSFY1Q96LI6 401 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 NUDT9Q9BW91 350 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 ACTRT3Q9BYD9 372 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 CNTNAP3Q9BZ76 1288 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 CDT1Q9H211 546 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.53□□□□□ -1.044e-6■□□□□ 11.2
LIG3-202ENST00000378526 TMPRSS11EQ9UL52 423 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 NUDT19A8MXV4 375 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 TLR4O00206 839 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 AGR2O95994 175 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 SERPINA7P05543 415 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 BAMBIQ13145 260 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 RNASE10Q5GAN6 216 aaKnown RBP8.53□□□□□ -1.04
LIG3-202ENST00000378526 CMIPQ8IY22 773 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 CCDC71LQ8N9Z2 235 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 ENGASEQ8NFI3 743 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 IFI44Q8TCB0 444 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 ZNF675Q8TD23 568 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 FBXO32Q969P5 355 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 ARPC5LQ9BPX5 153 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 OR51V1Q9H2C8 321 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 GJB4Q9NTQ9 266 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 SCN2BO60939 215 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 FAM162BQ5T6X4 162 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 RALGPS2Q86X27 583 aaPredicted RBP8.53□□□□□ -1.04
LIG3-202ENST00000378526 IQCKQ8N0W5 287 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 OR2A12Q8NGT7 310 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 OR8D1Q8WZ84 308 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 TMEM176AQ96HP8 235 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 MRPL45Q9BRJ2 306 aaKnown RBP8.53□□□□□ -1.04
LIG3-202ENST00000378526 ABCG5Q9H222 651 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 GPN2Q9H9Y4 310 aaPredicted RBP8.53□□□□□ -1.04
LIG3-202ENST00000378526 ELOA3DA6NLF2 546 aaPredicted RBP8.53□□□□□ -1.04
LIG3-202ENST00000378526 SEC14L6B5MCN3 397 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 ATG13O75143 517 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 LRATO95237 230 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 ALPPL2P10696 532 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 HOXB9P17482 250 aaPredicted RBP8.53□□□□□ -1.04
LIG3-202ENST00000378526 MAOBP27338 520 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 OR1E1P30953 314 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 AKT2P31751 481 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 KHKP50053 298 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 ELOA3BQ3SY89 546 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms