RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 OR52K2Q8NGK3 314 aa11.47□□□□□ -0.57
NPHP4-202ENST00000378161 CD101Q93033 1021 aa11.47□□□□□ -0.57
NPHP4-202ENST00000378161 CSF3RQ99062 836 aa11.47□□□□□ -0.57
NPHP4-202ENST00000378161 METTL8Q9H825 291 aaKnown RBP11.47□□□□□ -0.57
NPHP4-202ENST00000378161 ACTR8Q9H981 624 aa11.47□□□□□ -0.57
NPHP4-202ENST00000378161 TMEM39AQ9NV64 488 aa11.47□□□□□ -0.57
NPHP4-202ENST00000378161 ADAM28Q9UKQ2 775 aa11.47□□□□□ -0.57
NPHP4-202ENST00000378161 PCDHA11Q9Y5I1 949 aa11.47□□□□□ -0.57
NPHP4-202ENST00000378161 TRAV19A0A0A6YYK7 116 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 TUBAL3A6NHL2 446 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 METTL18O95568 372 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 LY86O95711 162 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 AGXTP21549 392 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 PCSK1P29120 753 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 LIMK2P53671 638 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 GEMP55040 296 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 ZNF91Q05481 1191 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 SMAD4Q13485 552 aaKnown RBP11.46□□□□□ -0.57
NPHP4-202ENST00000378161 GPR50Q13585 617 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 TCEAL1Q15170 157 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 SPOUT1Q5T280 376 aaKnown RBP11.46□□□□□ -0.57
NPHP4-202ENST00000378161 ELP5Q8TE02 316 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 ULK4Q96C45 1275 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 MYRFLQ96LU7 910 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 RPRD1AQ96P16 312 aaPredicted RBP11.46□□□□□ -0.57
NPHP4-202ENST00000378161 ASPNQ9BXN1 380 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 FAM86C1Q9NVL1 165 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 CTSFQ9UBX1 484 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 HACL1Q9UJ83 578 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 KAT6AQ92794 2004 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 C5P01031 1676 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 A0A0A0MRY4 1105 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 MITFO75030 526 aaPredicted RBP11.46□□□□□ -0.57
NPHP4-202ENST00000378161 CSH1P0DML2 217 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 CSH2P0DML3 217 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 HOXC13P31276 330 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 SHMT2P34897 504 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 TGM4P49221 684 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 RAB5CP51148 216 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 ZNF235Q14590 738 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 RAET1GQ6H3X3 334 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 MAMDC4Q6UXC1 1216 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 CMC1Q7Z7K0 106 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 ABI1Q8IZP0 508 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 SPATA6LQ8N4H0 392 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 OR5K1Q8NHB7 308 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 SPATA13Q96N96 652 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 PTDSS2Q9BVG9 487 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 DPAGT1Q9H3H5 408 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 ELAC1Q9H777 363 aaKnown RBP11.46□□□□□ -0.57
NPHP4-202ENST00000378161 ARHGAP28Q9P2N2 729 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 COMMD3Q9UBI1 195 aa11.46□□□□□ -0.57
NPHP4-202ENST00000378161 POM121CA8CG34 1229 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 CLCA1A8K7I4 914 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 HPGDSO60760 199 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 TMEM63AO94886 807 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 CHRNGP07510 517 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 PSMA3P25788 255 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 AVPR1AP37288 418 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 CREB5Q02930 508 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 RAB33AQ14088 237 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 CTF1Q16619 201 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 VPS26BQ4G0F5 336 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 PPM1JQ5JR12 505 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 ZNF561Q8N587 486 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 NAT8LQ8N9F0 302 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 STOML3Q8TAV4 291 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 ZNF670Q9BS34 389 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 LHX5Q9H2C1 402 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 WDCPQ9H6R7 721 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 LYARQ9NX58 379 aaKnown RBP11.46□□□□□ -0.58
NPHP4-202ENST00000378161 A0A087WZ62 844 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 A0A0G2JMP0 313 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 TEX46H3BTG2 121 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 KIAA0355O15063 1070 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 NARSO43776 548 aaKnown RBP11.46□□□□□ -0.58
NPHP4-202ENST00000378161 ATP6AP2O75787 350 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 CDC123O75794 336 aaPredicted RBP11.46□□□□□ -0.58
NPHP4-202ENST00000378161 JCHAINP01591 159 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 ZNF35P13682 527 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 CSF2RAP15509 400 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 HTR2AP28223 471 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 RGS6P49758 472 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 GMPSP49915 693 aaPredicted RBP11.46□□□□□ -0.58
NPHP4-202ENST00000378161 PCLAFQ15004 111 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 AMHR2Q16671 573 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 RBM23Q86U06 439 aaKnown RBP11.46□□□□□ -0.58
NPHP4-202ENST00000378161 SLC9B2Q86UD5 537 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 OR2L5Q8NG80 312 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 RFKQ969G6 155 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 LINC00052Q96N35 136 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 FDXACB1Q9BRP7 624 aaPredicted RBP11.46□□□□□ -0.58
NPHP4-202ENST00000378161 STRA6Q9BX79 667 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 OPA3Q9H6K4 179 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 GSN-AS1Q9NRJ2 163 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 PCDHB5Q9Y5E4 795 aa11.46□□□□□ -0.58
NPHP4-202ENST00000378161 A0A1B0GV90 55 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 LACTBL1A8MY62 500 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 LRCH4O75427 683 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 PAPSS2O95340 614 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms