RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 OR9Q1Q8NGQ5 310 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 ZBED6CLQ96FA7 236 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 DCBLD2Q96PD2 775 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 DGAT2Q96PD7 388 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 DUSP26Q9BV47 211 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 MBNL1Q9NR56 388 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 UTS2RQ9UKP6 389 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 PLEKHM1Q9Y4G2 1056 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 LYVE1Q9Y5Y7 322 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 CACNA1CQ13936 2221 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 PDPK1O15530 556 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 IL6P05231 212 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 FASP25445 335 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 IL12BP29460 328 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 OTX2P32243 289 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 RPL4P36578 427 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 METAP1P53582 386 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 DOC2AQ14183 400 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 CCDC81Q6ZN84 652 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 SFTPA1Q8IWL2 248 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 OR2T12Q8NG77 320 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 OR4K1Q8NGD4 311 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 OR52B6Q8NGF0 335 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 TMEM109Q9BVC6 243 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 COPG1Q9Y678 874 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 TMEM202A6NGA9 273 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 SLC9B1P1A6NJY1 282 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 I6L893 689 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 HEXBP07686 556 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 ATXN1LP0C7T5 689 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 NQO1P15559 274 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 DRD4P21917 467 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 CCR7P32248 378 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 IGFALSP35858 605 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 INPP1P49441 399 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 RACK1P63244 317 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 PRMT9Q6P2P2 845 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 ADHFE1Q8IWW8 467 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 CBARPQ8N350 705 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 LILRA3Q8N6C8 439 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 SMRP1Q8NCR6 262 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 PYDC1Q8WXC3 89 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 C5orf34Q96MH7 638 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 NDEL1Q9GZM8 345 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 AKTIPQ9H8T0 292 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 POLR1BQ9H9Y6 1135 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 MRTO4Q9UKD2 239 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 PDE10AQ9Y233 779 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 PLXNB2O15031 1838 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 UTRNP46939 3433 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 SHISA7A6NL88 538 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 DEAF1O75398 565 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 UBXN7O94888 489 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 HLA-DQA2P01906 255 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 SERPINA6P08185 405 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 C1GALT1C1LP0DN25 315 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 PRPS2P11908 318 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 CD1DP15813 335 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 LHCGRP22888 699 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 MMP12P39900 470 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 HK3P52790 923 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 SRSF5Q13243 272 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 OR4F3Q6IEY1 312 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 SPATA19Q7Z5L4 167 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 FAM13CQ8NE31 585 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 OR13J1Q8NGT2 312 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 RP9Q8TA86 221 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 CENPTQ96BT3 561 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 RTP4Q96DX8 246 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 PDXPQ96GD0 296 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 RANBP9Q96S59 729 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 ZNF607Q96SK3 696 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 TBC1D10AQ9BXI6 508 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 SMOC1Q9H4F8 434 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 FGF22Q9HCT0 170 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 SPAG4Q9NPE6 437 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 KRCC1Q9NPI7 259 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 TEKT2Q9UIF3 430 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 SCOCQ9UIL1 159 aa8.19□□□□□ -1.1
CRNKL1-202ENST00000377340 TRPM6Q9BX84 2022 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 CCDC189A1A4V9 331 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 FAM92AA1XBS5 289 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 NPHS1O60500 1241 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 TPST2O60704 377 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 RFPL1O75677 317 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 LDLRP01130 860 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 F3P13726 295 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 IL7RP16871 459 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 CD27P26842 260 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 IDH2P48735 452 aaKnown RBP8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 RPS15P62841 145 aaKnown RBP8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 MTAPQ13126 283 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 GPR68Q15743 365 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 SLC9B1Q4ZJI4 515 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 UBAP2Q5T6F2 1119 aaKnown RBP8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 CCDC116Q8IYX3 515 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 ACVR1CQ8NER5 493 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 BHLHE22Q8NFJ8 381 aaPredicted RBP8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 OR9I1Q8NGQ6 314 aa8.18□□□□□ -1.1
CRNKL1-202ENST00000377340 SUN3Q8TAQ9 357 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms