RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 PTOV1Q86YD1 416 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 HSH2DQ96JZ2 352 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 FCRL1Q96LA6 429 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 MYOCQ99972 504 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 BBS2Q9BXC9 721 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 KIF17Q9P2E2 1029 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 SAMHD1Q9Y3Z3 626 aaKnown RBP24.51■■□□□ 1.51
C9orf40-201ENST00000376854 SLC16A5O15375 505 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 SCN2BO60939 215 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 JRKO75564 520 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 C1SP09871 688 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 ATP1B2P14415 290 aaPredicted RBP24.51■■□□□ 1.51
C9orf40-201ENST00000376854 ACVR2AP27037 513 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 PLEKHS1Q5SXH7 462 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 SERPINA13PQ6UXR4 307 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 ZDHHC6Q9H6R6 413 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 MRPL17Q9NRX2 175 aaKnown RBP24.51■■□□□ 1.51
C9orf40-201ENST00000376854 ERVK-11Q9UQG0 969 aa24.51■■□□□ 1.51
C9orf40-201ENST00000376854 TOR1BO14657 336 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 AP1S2P56377 157 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 PFN3P60673 137 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 ADPRMQ3LIE5 342 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 EIF3MQ7L2H7 374 aaKnown RBP24.5■■□□□ 1.51
C9orf40-201ENST00000376854 CLECL1Q8IZS7 167 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 ZNF540Q8NDQ6 660 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 CDC26Q8NHZ8 85 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 NDNFQ8TB73 568 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 GLMNQ92990 594 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 YIPF6Q96EC8 236 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 MAGEB10Q96LZ2 347 aaPredicted RBP24.5■■□□□ 1.51
C9orf40-201ENST00000376854 DEFB118Q96PH6 123 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 RHNO1Q9BSD3 238 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 CFHR5Q9BXR6 569 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 ASPSCR1Q9BZE9 553 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 NECTIN3Q9NQS3 549 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 NDRG4Q9ULP0 352 aaKnown RBP24.5■■□□□ 1.51
C9orf40-201ENST00000376854 M0R3G1 203 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 PRMT3O60678 531 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 MTX2O75431 263 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 HOXA9P31269 272 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 SPINT3P49223 89 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 LSM3P62310 102 aaKnown RBP24.5■■□□□ 1.51
C9orf40-201ENST00000376854 IRF8Q02556 426 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 SMN1Q16637 294 aaKnown RBP24.5■■□□□ 1.51
C9orf40-201ENST00000376854 C22orf39Q6P5X5 142 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 HTR3DQ70Z44 454 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 CBLL1Q75N03 491 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 TCEAL8Q8IYN2 117 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 CPXM2Q8N436 756 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 ATG16L2Q8NAA4 619 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 TMEM169Q96HH4 297 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 WDR12Q9GZL7 423 aaKnown RBP24.5■■□□□ 1.51
C9orf40-201ENST00000376854 KRT84Q9NSB2 600 aa24.5■■□□□ 1.51
C9orf40-201ENST00000376854 MT-ND2P03891 347 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 EPHA2P29317 976 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 MASP1P48740 699 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 ZDHHC20Q5W0Z9 365 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 P2RY8Q86VZ1 359 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 VMP1Q96GC9 406 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 AKIP1Q9NQ31 210 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 FAM120CQ9NX05 1096 aaKnown RBP24.49■■□□□ 1.51
C9orf40-201ENST00000376854 VPS29Q9UBQ0 182 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 B4GALT6Q9UBX8 382 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 NRG2O14511 850 aaPredicted RBP24.49■■□□□ 1.51
C9orf40-201ENST00000376854 PARNO95453 639 aaKnown RBP24.49■■□□□ 1.51
C9orf40-201ENST00000376854 CD22P20273 847 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 PSMB9P28065 219 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 GABRR2P28476 465 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 ALDH4A1P30038 563 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 CSTF3Q12996 717 aaKnown RBP24.49■■□□□ 1.51
C9orf40-201ENST00000376854 DGCR6Q14129 220 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 CLCA4Q14CN2 919 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 MAD2L1BPQ15013 274 aaPredicted RBP24.49■■□□□ 1.51
C9orf40-201ENST00000376854 CYP2A13Q16696 494 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 TRIM16LQ309B1 348 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 SYT6Q5T7P8 510 aaPredicted RBP24.49■■□□□ 1.51
C9orf40-201ENST00000376854 SLC39A11Q8N1S5 342 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 OR8J2Q8NGG1 315 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 VWCEQ96DN2 955 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 MTERF1Q99551 399 aaKnown RBP24.49■■□□□ 1.51
C9orf40-201ENST00000376854 ARMC7Q9H6L4 198 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 BRD9Q9H8M2 597 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 REEP1Q9H902 201 aa24.49■■□□□ 1.51
C9orf40-201ENST00000376854 FAM20BO75063 409 aa24.48■■□□□ 1.51
C9orf40-201ENST00000376854 FADS2O95864 444 aaKnown RBP24.48■■□□□ 1.51
C9orf40-201ENST00000376854 VBP1P61758 197 aa24.48■■□□□ 1.51
C9orf40-201ENST00000376854 KIAA1614Q5VZ46 1190 aa24.48■■□□□ 1.51
C9orf40-201ENST00000376854 LIPJQ5W064 366 aa24.48■■□□□ 1.51
C9orf40-201ENST00000376854 GPR155Q7Z3F1 870 aa24.48■■□□□ 1.51
C9orf40-201ENST00000376854 TSPYL5Q86VY4 417 aaPredicted RBP24.48■■□□□ 1.51
C9orf40-201ENST00000376854 ZNF296Q8WUU4 475 aaPredicted RBP24.48■■□□□ 1.51
C9orf40-201ENST00000376854 PCDH12Q9NPG4 1184 aa24.48■■□□□ 1.51
C9orf40-201ENST00000376854 KPNA4O00629 521 aaPredicted RBP24.47■■□□□ 1.51
C9orf40-201ENST00000376854 RGS10O43665 173 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 EFNA1P20827 205 aaPredicted RBP24.47■■□□□ 1.51
C9orf40-201ENST00000376854 CDH3P22223 829 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 DDX39BQ13838 428 aaKnown RBP24.47■■□□□ 1.51
C9orf40-201ENST00000376854 XKR6Q5GH73 641 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 PDE12Q6L8Q7 609 aaKnown RBP24.47■■□□□ 1.51
C9orf40-201ENST00000376854 SVOPQ8N4V2 548 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms