RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 OR10A6Q8NH74 314 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 ZFP90Q8TF47 636 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 RSPRY1Q96DX4 576 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 PSD2Q9BQI7 771 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 IKZF5Q9H5V7 419 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 LTB4R2Q9NPC1 389 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 RAD18Q9NS91 495 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 TMEM9Q9P0T7 183 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 PRKAG2Q9UGJ0 569 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 ERVK-11Q9UQG0 969 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 ITM2BQ9Y287 266 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 PSMD11O00231 422 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 TSPAN6O43657 245 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 GGT1P19440 569 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 TGM1P22735 817 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 VIPR2P41587 438 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 CLDN8P56748 225 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 CYP4F3Q08477 520 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 CHIT1Q13231 466 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 RNF175Q8N4F7 328 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 LILRA3Q8N6C8 439 aaPredicted RBP13.55□□□□□ -0.24
MSH5-202ENST00000375740 CELF5Q8N6W0 485 aaKnown RBP13.55□□□□□ -0.24
MSH5-202ENST00000375740 FOXJ1Q92949 421 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 APIPQ96GX9 242 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 LRIG1Q96JA1 1093 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 RAD21L1Q9H4I0 556 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 CLDN25C9JDP6 229 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 LDLRP01130 860 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 ANXA6P08133 673 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 ELFN1P0C7U0 828 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 TACR1P25103 407 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 MMP12P39900 470 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 CAPGP40121 348 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 PREPP48147 710 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 METAP1P53582 386 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 PLA2G16P53816 162 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 UBE3AQ05086 875 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 MESP2Q0VG99 397 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 GTDC1Q4AE62 458 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 RUNDC3AQ59EK9 446 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 TMTC4Q5T4D3 741 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 PARS2Q7L3T8 475 aaKnown RBP13.54□□□□□ -0.24
MSH5-202ENST00000375740 RIMKLAQ8IXN7 391 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 TERB1Q8NA31 727 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 OR2T12Q8NG77 320 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 GLYATL1Q969I3 302 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 AP2M1Q96CW1 435 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 CMTM7Q96FZ5 175 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 MUS81Q96NY9 551 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 TSSK3Q96PN8 268 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 WRAP53Q9BUR4 548 aaKnown RBP13.54□□□□□ -0.24
MSH5-202ENST00000375740 SLC6A13Q9NSD5 602 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 NFKBIL1Q9UBC1 381 aaPredicted RBP13.54□□□□□ -0.24
MSH5-202ENST00000375740 KLHL3Q9UH77 587 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 ARHGEF33A8MVX0 844 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 H0Y858 1186 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 KPNA3O00505 521 aaPredicted RBP13.54□□□□□ -0.24
MSH5-202ENST00000375740 BCAS1O75363 584 aaPredicted RBP13.54□□□□□ -0.24
MSH5-202ENST00000375740 TULP3O75386 442 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 RASAL1O95294 804 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 PRPS2P11908 318 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 CDH1P12830 882 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 MYOGP15173 224 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 SHMT2P34897 504 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 NR4A2P43354 598 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 ST8SIA6P61647 398 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 TMEM115Q12893 351 aaPredicted RBP13.54□□□□□ -0.24
MSH5-202ENST00000375740 CCSMST1Q4G0I0 132 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.54□□□□□ -0.24
MSH5-202ENST00000375740 AGAP7PQ5VUJ5 663 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 ERAP2Q6P179 960 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 SLC22A15Q8IZD6 547 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 CLIP4Q8N3C7 705 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 BPIFB1Q8TDL5 484 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 HCAR2Q8TDS4 363 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 CLIP3Q96DZ5 547 aa13.54□□□□□ -0.24
MSH5-202ENST00000375740 GSTA4O15217 222 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 PSIP1O75475 530 aaKnown RBP13.53□□□□□ -0.24
MSH5-202ENST00000375740 GMNNO75496 209 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 GSTM1P09488 218 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 PRPH2P23942 346 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 S100A3P33764 101 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 SLC6A11P48066 632 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 MAPK11Q15759 364 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 SYTL3Q4VX76 610 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 PYCR3Q53H96 274 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 FRG2Q64ET8 278 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 TMEM220Q6QAJ8 160 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 CYP2U1Q7Z449 544 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 C12orf76Q8N812 135 aaPredicted RBP13.53□□□□□ -0.24
MSH5-202ENST00000375740 FIG4Q92562 907 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 NXPE3Q969Y0 559 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 FKBP10Q96AY3 582 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 VPS35Q96QK1 796 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 FRG2BQ96QU4 278 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 TBCDQ9BTW9 1192 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 GPN2Q9H9Y4 310 aaPredicted RBP13.53□□□□□ -0.24
MSH5-202ENST00000375740 SMPD3Q9NY59 655 aaPredicted RBP13.53□□□□□ -0.24
MSH5-202ENST00000375740 PRRT4C9JH25 899 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 WNT9AO14904 365 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms