RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 HSH2DQ96JZ2 352 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 BBS2Q9BXC9 721 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 RASSF1Q9NS23 344 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 TRNAU1APQ9NX07 287 aaKnown RBP14.1□□□□□ -0.15
MSH5-201ENST00000375703 SRRDQ9UH36 339 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 ERVK-11Q9UQG0 969 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 PIKFYVEQ9Y2I7 2098 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 RGS10O43665 173 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 SCN2BO60939 215 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 FAM20BO75063 409 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 FADS2O95864 444 aaKnown RBP14.1□□□□□ -0.15
MSH5-201ENST00000375703 SEMG1P04279 462 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 SRCP12931 536 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 ATP1B2P14415 290 aaPredicted RBP14.1□□□□□ -0.15
MSH5-201ENST00000375703 IRF8Q02556 426 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 MAD2L1BPQ15013 274 aaPredicted RBP14.1□□□□□ -0.15
MSH5-201ENST00000375703 MPPE1Q53F39 396 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 LINC00299Q6ZSB3 139 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 ADCK1Q86TW2 530 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 PTOV1Q86YD1 416 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 BBS7Q8IWZ6 715 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 CLECL1Q8IZS7 167 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 SVOPQ8N4V2 548 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 FIBINQ8TAL6 211 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 TPD52L3Q96J77 140 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 ALPK1Q96QP1 1244 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 RHNO1Q9BSD3 238 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 REEP1Q9H902 201 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 VPS29Q9UBQ0 182 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 CD84Q9UIB8 345 aa14.1□□□□□ -0.15
MSH5-201ENST00000375703 SERPINB7O75635 380 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 ALDH1A1P00352 501 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 SOD2P04179 222 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 TPP2P29144 1249 aaPredicted RBP14.09□□□□□ -0.15
MSH5-201ENST00000375703 SERPINB10P48595 397 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 MASP1P48740 699 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 PFN3P60673 137 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 SFSWAPQ12872 951 aaKnown RBP14.09□□□□□ -0.15
MSH5-201ENST00000375703 PERM1Q5SV97 790 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 SPOUT1Q5T280 376 aaKnown RBP14.09□□□□□ -0.15
MSH5-201ENST00000375703 KIAA1614Q5VZ46 1190 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 PDE12Q6L8Q7 609 aaKnown RBP14.09□□□□□ -0.15
MSH5-201ENST00000375703 UBE2FQ969M7 185 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 VOPP1Q96AW1 172 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 MROQ9BYG7 248 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 PCDH12Q9NPG4 1184 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 TMPRSS11EQ9UL52 423 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 PPIL1Q9Y3C6 166 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 SLC16A5O15375 505 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 PRMT3O60678 531 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 ATP6V1G1O75348 118 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 AP1S2P56377 157 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 OXA1LQ15070 435 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 PLEKHS1Q5SXH7 462 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 LIPJQ5W064 366 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 SERPINA13PQ6UXR4 307 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 OR8J2Q8NGG1 315 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 RAET1EQ8TD07 263 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 TAMM41Q96BW9 452 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 ECHDC3Q96DC8 303 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 FCRL1Q96LA6 429 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 MAGEB10Q96LZ2 347 aaPredicted RBP14.09□□□□□ -0.15
MSH5-201ENST00000375703 MTERF1Q99551 399 aaKnown RBP14.09□□□□□ -0.15
MSH5-201ENST00000375703 CCNB1IP1Q9NPC3 277 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 ACOT13Q9NPJ3 140 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 FAM120CQ9NX05 1096 aaKnown RBP14.09□□□□□ -0.15
MSH5-201ENST00000375703 CFAP97Q9P2B7 532 aa14.09□□□□□ -0.15
MSH5-201ENST00000375703 ABT1Q9ULW3 272 aaKnown RBP14.09□□□□□ -0.15
MSH5-201ENST00000375703 TET1Q8NFU7 2136 aa14.08□□□□□ -0.15
MSH5-201ENST00000375703 MTX2O75431 263 aa14.08□□□□□ -0.15
MSH5-201ENST00000375703 OLFM2O95897 454 aa14.08□□□□□ -0.15
MSH5-201ENST00000375703 EFNA1P20827 205 aaPredicted RBP14.08□□□□□ -0.15
MSH5-201ENST00000375703 HPCAL1P37235 193 aa14.08□□□□□ -0.15
MSH5-201ENST00000375703 SPINT3P49223 89 aa14.08□□□□□ -0.15
MSH5-201ENST00000375703 RPP38P78345 283 aaKnown RBP14.08□□□□□ -0.15
MSH5-201ENST00000375703 NPRL3Q12980 569 aa14.08□□□□□ -0.15
MSH5-201ENST00000375703 SP140Q13342 867 aa14.08□□□□□ -0.15
MSH5-201ENST00000375703 DDX39BQ13838 428 aaKnown RBP14.08□□□□□ -0.15
MSH5-201ENST00000375703 SF1Q15637 639 aaKnown RBP14.08□□□□□ -0.15
MSH5-201ENST00000375703 INAQ16352 499 aa14.08□□□□□ -0.15
MSH5-201ENST00000375703 XKR6Q5GH73 641 aa14.08□□□□□ -0.15
MSH5-201ENST00000375703 LRRC73Q5JTD7 316 aa14.08□□□□□ -0.15
MSH5-201ENST00000375703 ZNF300Q96RE9 604 aaPredicted RBP14.08□□□□□ -0.15
MSH5-201ENST00000375703 TPT1P8Q9HAU6 139 aa14.08□□□□□ -0.15
MSH5-201ENST00000375703 IL21Q9HBE4 155 aa14.08□□□□□ -0.15
MSH5-201ENST00000375703 MRPL17Q9NRX2 175 aaKnown RBP14.08□□□□□ -0.15
MSH5-201ENST00000375703 THUMPD1Q9NXG2 353 aaKnown RBP14.08□□□□□ -0.15
MSH5-201ENST00000375703 YY2O15391 372 aa14.08□□□□□ -0.16
MSH5-201ENST00000375703 CKMP06732 381 aa14.08□□□□□ -0.16
MSH5-201ENST00000375703 C1SP09871 688 aa14.08□□□□□ -0.16
MSH5-201ENST00000375703 LAMP1P11279 417 aa14.08□□□□□ -0.16
MSH5-201ENST00000375703 CYP4F8P98187 520 aa14.08□□□□□ -0.16
MSH5-201ENST00000375703 CSTF3Q12996 717 aaKnown RBP14.08□□□□□ -0.16
MSH5-201ENST00000375703 RAB33AQ14088 237 aa14.08□□□□□ -0.16
MSH5-201ENST00000375703 MPP7Q5T2T1 576 aa14.08□□□□□ -0.16
MSH5-201ENST00000375703 ZDHHC20Q5W0Z9 365 aa14.08□□□□□ -0.16
MSH5-201ENST00000375703 HTR3DQ70Z44 454 aa14.08□□□□□ -0.16
MSH5-201ENST00000375703 ALOXE3Q9BYJ1 711 aa14.08□□□□□ -0.16
MSH5-201ENST00000375703 ZDHHC6Q9H6R6 413 aa14.08□□□□□ -0.16
MSH5-201ENST00000375703 BRD9Q9H8M2 597 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms