RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 CEACAM5P06731 702 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PCNAP12004 261 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 UQCRBP14927 111 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 HRH2P25021 359 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ASMTP46597 345 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 OR4D2P58180 307 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SRSF11Q05519 484 aaKnown RBP17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CYP4F3Q08477 520 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 BLMHQ13867 455 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 HIST2H2ACQ16777 129 aaPredicted RBP17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 HIST2H2AA3Q6FI13 130 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 GALNT18Q6P9A2 607 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ERMP1Q7Z2K6 904 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TBC1D21Q8IYX1 336 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PHC3Q8NDX5 983 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 LRTOMTQ8WZ04 291 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MENTQ9BUN1 341 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 EBPLQ9BY08 206 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TRIT1Q9H3H1 467 aaKnown RBP17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 H0YJX3 145 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 HOXC4P09017 264 aaPredicted RBP17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 IL10P22301 178 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PTPN6P29350 595 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PIK3CBP42338 1070 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 KIR3DL1P43629 444 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 RAE1P78406 368 aaKnown RBP17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SFSWAPQ12872 951 aaKnown RBP17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MTX3Q5HYI7 312 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ADNP2Q6IQ32 1131 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 GPR180Q86V85 440 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PAPD5Q8NDF8 572 aaKnown RBP17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TNIP2Q8NFZ5 429 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 N4BP2L2Q92802 583 aaPredicted RBP17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SIPA1Q96FS4 1042 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SCARF2Q96GP6 870 aaPredicted RBP17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 EGLN2Q96KS0 407 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ZNF583Q96ND8 569 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 GUCD1Q96NT3 240 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 IL17FQ96PD4 163 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CPPED1Q9BRF8 314 aaPredicted RBP17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 DMRT3Q9NQL9 472 aa17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.36■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MYO10Q9HD67 2058 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 C2CD4DB7Z1M9 353 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 FUCA1P04066 466 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MTHFD1P11586 935 aaKnown RBP17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 BMP2P12643 396 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TIA1P31483 386 aaKnown RBP eCLIP17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CLCNKAP51800 687 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 RPS13P62277 151 aaKnown RBP17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MRPS35P82673 323 aaKnown RBP17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CTBSQ01459 385 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TSTA3Q13630 321 aaPredicted RBP17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 UGT8Q16880 541 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TBCELQ5QJ74 424 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 HMBOX1Q6NT76 420 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 LPCAT2Q7L5N7 544 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CAMKMTQ7Z624 323 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TMEM132CQ8N3T6 1108 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 C1orf52Q8N6N3 182 aaKnown RBP17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ANKFN1Q8N957 763 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 OR8J2Q8NGG1 315 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 NELL1Q92832 810 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 APOOQ9BUR5 198 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 BTBD1Q9H0C5 482 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PCBD2Q9H0N5 130 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 VCXQ9H320 206 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PELI2Q9HAT8 420 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 FAM120CQ9NX05 1096 aaKnown RBP17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 USP22Q9UPT9 525 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 NCKAP1Q9Y2A7 1128 aa17.35■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TBC1D3DA0A087WVF3 549 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TBC1D3IA0A087WXS9 549 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TBC1D3EA0A087X179 549 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TBC1D3KA0A087X1G2 549 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TBC1D3FA6NER0 549 aaPredicted RBP17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PRR23AA6NEV1 266 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TBC1D3LB9A6J9 549 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CACNB4O00305 520 aaPredicted RBP17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TBC1D3HP0C7X1 549 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 FCGR1AP12314 374 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ACP5P13686 325 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 GLULP15104 373 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 NCK1P16333 377 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 GGT1P19440 569 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 HSPA13P48723 471 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TRPC1P48995 793 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PHEXP78562 749 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PLIN5Q00G26 463 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PYCR3Q53H96 274 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 THEMIS2Q5TEJ8 643 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TBC1D3GQ6DHY5 549 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TBC1D3CQ6IPX1 549 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CHST15Q7LFX5 561 aaPredicted RBP17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 FAM129CQ86XR2 697 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TBC1D3Q8IZP1 549 aaPredicted RBP17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SLC44A3Q8N4M1 653 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 DTWD1Q8N5C7 304 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 LMNTD1Q8N9Z9 388 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 DENND6BQ8NEG7 585 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms