RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 ABATP80404 500 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 HTRA3P83110 453 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 NAE1Q13564 534 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 DOC2AQ14183 400 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 STARD3Q14849 445 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 PTPRRQ15256 657 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 SLC36A3Q495N2 470 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 CPTPQ5TA50 214 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 METRNLQ641Q3 311 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 CPZQ66K79 652 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 PNCKQ6P2M8 343 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 SLC2A7Q6PXP3 512 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 ABRAXAS1Q6UWZ7 409 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 CYP2R1Q6VVX0 501 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 SLCO4C1Q6ZQN7 724 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 PIWIL3Q7Z3Z3 882 aaKnown RBP8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 PDZD3Q86UT5 571 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 ZCCHC7Q8N3Z6 543 aaKnown RBP8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 DNAJC5GQ8N7S2 189 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 OR7G3Q8NG95 312 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 FAM174AQ8TBP5 190 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 CYB5D2Q8WUJ1 264 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 ZFPM2Q8WW38 1151 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 SLC5A11Q8WWX8 675 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 SMPDL3AQ92484 453 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 NCSTNQ92542 709 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 RMND5BQ96G75 393 aaPredicted RBP8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 PYURFQ96I23 114 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 IL1RL2Q9HB29 575 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 SGK2Q9HBY8 427 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 PRDM9Q9NQV7 894 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 PHPT1Q9NRX4 125 aaPredicted RBP8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 INTS7Q9NVH2 962 aaKnown RBP8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 ZSCAN32Q9NX65 697 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 FZD4Q9ULV1 537 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 ICKQ9UPZ9 632 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 DMTF1Q9Y222 760 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 PCDHB11Q9Y5F2 797 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 PTGDR2Q9Y5Y4 395 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 DENND4AQ7Z401 1863 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 TRIM64CA6NLI5 447 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 OR2AG2A6NM03 316 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 MAGEB17A8MXT2 336 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 PRRT4C9JH25 899 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 FFAR3O14843 346 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 SCAMP2O15127 329 aaKnown RBP8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 GPR42O15529 346 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 CREG1O75629 220 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 POP7O75817 140 aaKnown RBP8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 KRT75O95678 551 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 SLC16A8O95907 504 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 ALBP02768 609 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 CA3P07451 260 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 NPPBP16860 134 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 ZNF23P17027 643 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 ITGA2P17301 1181 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 HOXB9P17482 250 aaPredicted RBP8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 TIA1P31483 386 aaKnown RBP eCLIP8.42□□□□□ -1.067e-14■■■■□ 21.6
SNRNP40-202ENST00000373720 GJA4P35212 333 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 CA5AP35218 305 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 NUDT1P36639 197 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 CAPGP40121 348 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 MAGEA2P43356 314 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 CLCNKAP51800 687 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 NTHL1P78549 312 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 HMGCS1Q01581 520 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 TAP2Q03519 686 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 ZNF763Q0D2J5 394 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 CAPRIN1Q14444 709 aaKnown RBP8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 CBX2Q14781 532 aaPredicted RBP8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 PTGR1Q14914 329 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 GRIN2CQ14957 1233 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 TMEM35AQ53FP2 167 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 RABL3Q5HYI8 236 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 SPANXN4Q5MJ08 99 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 RBM48Q5RL73 367 aaKnown RBP8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 ZNF776Q68DI1 518 aaPredicted RBP8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 TRIM40Q6P9F5 258 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 NXPE4Q6UWF7 544 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 MBOAT1Q6ZNC8 495 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 FAM92BQ6ZTR7 304 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 USP30Q70CQ3 517 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 TRAPPC5Q8IUR0 188 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 SYTL1Q8IYJ3 562 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 CFAP206Q8IYR0 622 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 C7orf61Q8IZ16 206 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 FAM156AQ8NDB6 213 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 SETD9Q8NE22 299 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 SRFBP1Q8NEF9 429 aaKnown RBP8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 DENND6BQ8NEG7 585 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 ZNF555Q8NEP9 628 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 ABHD11Q8NFV4 315 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 OR5K2Q8NHB8 316 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 ZNF480Q8WV37 535 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 RASSF5Q8WWW0 418 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 FAM162AQ96A26 154 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 MAGED4Q96JG8 741 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 PPM1MQ96MI6 270 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 PANX1Q96RD7 426 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms