RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 HS3ST3B1Q9Y662 390 aa18.33■□□□□ 0.52
TRAPPC3-204ENST00000373166 FAM187AA6NFU0 413 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 VPS26AO75436 327 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 MATN4O95460 622 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 ONECUT2O95948 504 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 PEBP1P30086 187 aaKnown RBP18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 ELK3P41970 407 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 ZXDCQ2QGD7 858 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 KLHL38Q2WGJ6 581 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 HP1BP3Q5SSJ5 553 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 ZNF549Q6P9A3 640 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 ISLR2Q6UXK2 745 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 LINC01555Q8NAE3 123 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 C2CD4AQ8NCU7 369 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 SPATA4Q8NEY3 305 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 THOC3Q96J01 351 aaKnown RBP18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 PWWP2AQ96N64 755 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 LMF1Q96S06 567 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 SLC26A1Q9H2B4 701 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 PPANQ9NQ55 473 aaKnown RBP18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 SPATA7Q9P0W8 599 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 KLHL42Q9P2K6 505 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 GALPQ9UBC7 116 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 NXT1Q9UKK6 140 aaKnown RBP18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 KLF2Q9Y5W3 355 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 CSMD2Q7Z408 3487 aa18.32■□□□□ 0.52
TRAPPC3-204ENST00000373166 HAUS5O94927 633 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 CATP04040 527 aaKnown RBP18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 ENO3P13929 434 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 RPL21P46778 160 aaKnown RBP18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 GCGRP47871 477 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 C2orf54Q08AI8 447 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 CALCOCO2Q13137 446 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 RBBP7Q16576 425 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 CCSMST1Q4G0I0 132 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 LINC00696Q6ZRV3 163 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 KIAA0408Q6ZU52 694 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 NEK10Q6ZWH5 1172 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 MAATS1Q7Z4T9 603 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 MCATQ8IVS2 390 aaKnown RBP18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 IGDCC3Q8IVU1 814 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 CNTN4Q8IWV2 1026 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 C2orf73Q8N5S3 287 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 GIMAP7Q8NHV1 300 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 SPSB2Q99619 263 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 GPR21Q99679 349 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 AARSD1Q9BTE6 412 aaKnown RBP18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 SEMA3GQ9NS98 782 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 INTS7Q9NVH2 962 aaKnown RBP18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 SNX24Q9Y343 169 aa18.31■□□□□ 0.52
TRAPPC3-204ENST00000373166 ITGAXP20702 1163 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 PTGER4P35408 488 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 CARSP49589 748 aaKnown RBP18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 PDIA2Q13087 525 aaKnown RBP18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 MFAP5Q13361 173 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 CUL1Q13616 776 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 YOD1Q5VVQ6 348 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 UGT3A1Q6NUS8 523 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 SHISA6Q6ZSJ9 500 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 GDF7Q7Z4P5 450 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 CATSPER1Q8NEC5 780 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 OR11G2Q8NGC1 345 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 OR1N1Q8NGS0 311 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 CD200R1Q8TD46 325 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 SLC30A3Q99726 388 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 SOX17Q9H6I2 414 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 TRMT6Q9UJA5 497 aaKnown RBP18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 MED16Q9Y2X0 877 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 DHRS7Q9Y394 339 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 TEX264Q9Y6I9 313 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 DIDO1Q9BTC0 2240 aaKnown RBP18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 POLQO75417 2590 aa18.3■□□□□ 0.52
TRAPPC3-204ENST00000373166 KRT87PA6NCN2 255 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 ARHGEF33A8MVX0 844 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 DSCR3O14972 297 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 PSIP1O75475 530 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 FKBP9O95302 570 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 MPC1LP0DKB6 136 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 MAGP20916 626 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 MRPS25P82663 173 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 SF1Q15637 639 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 STEAP4Q687X5 459 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 LRRC8EQ6NSJ5 796 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 COX15Q7KZN9 410 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 ANKMY2Q8IV38 441 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 FAM20CQ8IXL6 584 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 LMNTD1Q8N9Z9 388 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 HMGCLL1Q8TB92 370 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 MAGEB10Q96LZ2 347 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 NDNQ99608 321 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 WDR83Q9BRX9 315 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 DPH5Q9H2P9 285 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 CHST11Q9NPF2 352 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 CUTCQ9NTM9 273 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 SUCOQ9UBS9 1254 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 KLHL20Q9Y2M5 609 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 PDZD2O15018 2839 aa18.29■□□□□ 0.52
TRAPPC3-204ENST00000373166 ADGRG4Q8IZF6 3080 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms