RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 ZNF658BQ4V348 819 aaPredicted RBP18.11■□□□□ 0.49
USP49-202ENST00000373010 CCNYL2Q5T2Q4 361 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 TRAPPC5Q8IUR0 188 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 GPR156Q8NFN8 814 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 OR7G3Q8NG95 312 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 PNPT1Q8TCS8 783 aaKnown RBP18.11■□□□□ 0.49
USP49-202ENST00000373010 PYURFQ96I23 114 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 MBOAT4Q96T53 435 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 MAGIXQ9H6Y5 334 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 IFT80Q9P2H3 777 aaPredicted RBP18.11■□□□□ 0.49
USP49-202ENST00000373010 SH2B3Q9UQQ2 575 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 SLC27A6Q9Y2P4 619 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 U3KQV3 271 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 MMP20O60882 483 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 C1orf105O95561 183 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 ZNF682O95780 498 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 DCTP40126 519 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 ESRRGP62508 458 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 ZBED5Q49AG3 693 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 LRRC23Q53EV4 343 aaPredicted RBP18.1■□□□□ 0.49
USP49-202ENST00000373010 C9orf64Q5T6V5 341 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 CLVS1Q8IUQ0 354 aaPredicted RBP18.1■□□□□ 0.49
USP49-202ENST00000373010 ADHFE1Q8IWW8 467 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 ETFBKMTQ8IXQ9 262 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 KLHDC8AQ8IYD2 350 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 ZCCHC7Q8N3Z6 543 aaKnown RBP18.1■□□□□ 0.49
USP49-202ENST00000373010 HUS1BQ8NHY5 278 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 ZNF480Q8WV37 535 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 SMG7Q92540 1137 aaKnown RBP18.1■□□□□ 0.49
USP49-202ENST00000373010 SH3KBP1Q96B97 665 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 C11orf24Q96F05 449 aaPredicted RBP18.1■□□□□ 0.49
USP49-202ENST00000373010 HIC2Q96JB3 615 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 AASDHPPTQ9NRN7 309 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 KIAA1549LQ6ZVL6 1849 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 PCM1Q15154 2024 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 NUP210Q8TEM1 1887 aaPredicted RBP18.1■□□□□ 0.49
USP49-202ENST00000373010 A0A1B0GVG6 124 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 PSMD11O00231 422 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 PRMT3O60678 531 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 LILRB5O75023 590 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 CTBSQ01459 385 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 ZNF33BQ06732 778 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 PMS2P3Q13401 168 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 DPY19L1Q2PZI1 675 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 RAET1GQ6H3X3 334 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 TMC5Q6UXY8 1006 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 TMPRSS11BQ86T26 416 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 SYTL1Q8IYJ3 562 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 SVOPLQ8N434 492 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 NUS1Q96E22 293 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 DPH2Q9BQC3 489 aaPredicted RBP18.1■□□□□ 0.49
USP49-202ENST00000373010 AMBRA1Q9C0C7 1298 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 FAM118AQ9NWS6 357 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 VNN3Q9NY84 501 aa18.1■□□□□ 0.49
USP49-202ENST00000373010 ANTXRLA6NF34 631 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 E2F6O75461 281 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 MYO1DO94832 1006 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 PIGAP37287 484 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 RPS13P62277 151 aaKnown RBP18.09■□□□□ 0.49
USP49-202ENST00000373010 TBPL1P62380 186 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 HKDC1Q2TB90 917 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 CATSPEREQ5SY80 951 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 XKR5Q6UX68 686 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 SLCO4C1Q6ZQN7 724 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 ZZZ3Q8IYH5 903 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 OR8J2Q8NGG1 315 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 ZDHHC4Q9NPG8 344 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 EPN2O95208 641 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 KCNK5O95279 499 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 ANXA4P09525 319 aaPredicted RBP18.09■□□□□ 0.49
USP49-202ENST00000373010 C6P13671 934 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 ITGB7P26010 798 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 GPR1P46091 355 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 UBE3AQ05086 875 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 C16orf72Q14CZ0 275 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 GAB4Q2WGN9 574 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 SERPINA11Q86U17 422 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 OR5K1Q8NHB7 308 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 ING2Q9H160 280 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 POLR1BQ9H9Y6 1135 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 BRF2Q9HAW0 419 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 FAM120CQ9NX05 1096 aaKnown RBP18.09■□□□□ 0.49
USP49-202ENST00000373010 WBP1LQ9NX94 342 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 PRKAG2Q9UGJ0 569 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 EBF1Q9UH73 591 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 HEMK1Q9Y5R4 338 aaPredicted RBP18.09■□□□□ 0.49
USP49-202ENST00000373010 KCNE2Q9Y6J6 123 aa18.09■□□□□ 0.49
USP49-202ENST00000373010 GABRR3A8MPY1 467 aa18.08■□□□□ 0.49
USP49-202ENST00000373010 SCAMP2O15127 329 aaKnown RBP18.08■□□□□ 0.49
USP49-202ENST00000373010 HS6ST1O60243 411 aa18.08■□□□□ 0.49
USP49-202ENST00000373010 CCNDBP1O95273 360 aa18.08■□□□□ 0.49
USP49-202ENST00000373010 HSD3B1P14060 373 aa18.08■□□□□ 0.49
USP49-202ENST00000373010 PCSK2P16519 638 aa18.08■□□□□ 0.49
USP49-202ENST00000373010 HSD3B2P26439 372 aa18.08■□□□□ 0.49
USP49-202ENST00000373010 HNRNPFP52597 415 aaKnown RBP18.08■□□□□ 0.49
USP49-202ENST00000373010 STARD3Q14849 445 aa18.08■□□□□ 0.49
USP49-202ENST00000373010 HNRNPA1L2Q32P51 320 aaKnown RBP18.08■□□□□ 0.49
USP49-202ENST00000373010 CRTC3Q6UUV7 619 aa18.08■□□□□ 0.49
USP49-202ENST00000373010 KCTD8Q6ZWB6 473 aa18.08■□□□□ 0.49
USP49-202ENST00000373010 ADGRD2Q7Z7M1 963 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms