RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 THPOP40225 353 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 MAPKAPK2P49137 400 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 OR2B6P58173 313 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 ZXDBP98169 803 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 ZNF45Q02386 682 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 RGMBQ6NW40 437 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 TUBA3EQ6PEY2 450 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 ZNF598Q86UK7 904 aaKnown RBP13.29□□□□□ -0.28
USP49-201ENST00000373006 ZNF280BQ86YH2 543 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 SLC43A3Q8NBI5 491 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 OR52J3Q8NH60 311 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 SELENOMQ8WWX9 145 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 GGHQ92820 318 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 PANX1Q96RD7 426 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 EBPLQ9BY08 206 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 CLPBQ9H078 707 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 ANKHQ9HCJ1 492 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 TMEM184CQ9NVA4 438 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 PAQR5Q9NXK6 330 aaPredicted RBP13.29□□□□□ -0.28
USP49-201ENST00000373006 NOD1Q9Y239 953 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 SPEF1Q9Y4P9 236 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 PCDHB9Q9Y5E1 797 aa13.29□□□□□ -0.28
USP49-201ENST00000373006 A8MX80 341 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 ZW10O43264 779 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 CPSF4O95639 269 aaKnown RBP13.28□□□□□ -0.28
USP49-201ENST00000373006 PTHP01270 115 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 IL1RNP18510 177 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 ELP6Q0PNE2 266 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 ARMCX4Q5H9R4 360 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 LDLRAD1Q5T700 205 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 AGAP6Q5VW22 663 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 OR8H2Q8N162 312 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 TP53INP1Q96A56 240 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 AGAP4Q96P64 663 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 GPR63Q9BZJ6 419 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 ZNF221Q9UK13 617 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 SCO1O75880 301 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 KCNK5O95279 499 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 APOA1P02647 267 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 CLDN8P56748 225 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 VMACQ2NL98 169 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 BCL7AQ4VC05 210 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 SPANXN2Q5MJ10 180 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 ATAD3CQ5T2N8 411 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 ALG1LQ6GMV1 187 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 SLC46A3Q7Z3Q1 461 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 CYP4Z2PQ8N1L4 340 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 TP53I13Q8NBR0 393 aaPredicted RBP13.28□□□□□ -0.28
USP49-201ENST00000373006 APOLD1Q96LR9 279 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 NEDD4LQ96PU5 975 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 ADAM2Q99965 735 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 UCKL1Q9NWZ5 548 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 PSORS1C1Q9UIG5 152 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 GBF1Q92538 1859 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 MYO16Q9Y6X6 1858 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 HTTP42858 3142 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 KRT87PA6NCN2 255 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 SCAMP3O14828 347 aaKnown RBP13.28□□□□□ -0.28
USP49-201ENST00000373006 NUDT7P0C024 238 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 ZNF865P0CJ78 1059 aaPredicted RBP13.28□□□□□ -0.28
USP49-201ENST00000373006 TNFRSF1BP20333 461 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 CASP9P55211 416 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 PURAQ00577 322 aaKnown RBP13.28□□□□□ -0.28
USP49-201ENST00000373006 GDF6Q6KF10 455 aaPredicted RBP13.28□□□□□ -0.28
USP49-201ENST00000373006 SERPINA9Q86WD7 417 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 APIPQ96GX9 242 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 ADGRE3Q9BY15 652 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 AP3M1Q9Y2T2 418 aa13.28□□□□□ -0.28
USP49-201ENST00000373006 GFRA2O00451 464 aa13.27□□□□□ -0.28
USP49-201ENST00000373006 HOXC11O43248 304 aaPredicted RBP13.27□□□□□ -0.28
USP49-201ENST00000373006 PRKCAP17252 672 aa13.27□□□□□ -0.28
USP49-201ENST00000373006 SDC1P18827 310 aa13.27□□□□□ -0.28
USP49-201ENST00000373006 CR2P20023 1033 aa13.27□□□□□ -0.28
USP49-201ENST00000373006 RRM2P31350 389 aa13.27□□□□□ -0.28
USP49-201ENST00000373006 DEFA1P59665 94 aa13.27□□□□□ -0.28
USP49-201ENST00000373006 DEFA3P59666 94 aa13.27□□□□□ -0.28
USP49-201ENST00000373006 C16orf59Q7L2K0 433 aa13.27□□□□□ -0.28
USP49-201ENST00000373006 NRARPQ7Z6K4 114 aa13.27□□□□□ -0.28
USP49-201ENST00000373006 OR6F1Q8NGZ6 308 aa13.27□□□□□ -0.28
USP49-201ENST00000373006 UTP15Q8TED0 518 aaKnown RBP13.27□□□□□ -0.28
USP49-201ENST00000373006 MAL2Q969L2 176 aa13.27□□□□□ -0.28
USP49-201ENST00000373006 FEVQ99581 238 aa13.27□□□□□ -0.28
USP49-201ENST00000373006 SLC6A14Q9UN76 642 aa13.27□□□□□ -0.28
USP49-201ENST00000373006 OARD1Q9Y530 152 aa13.27□□□□□ -0.28
USP49-201ENST00000373006 LOC110117498-PIK3R3F6TDL0 507 aa13.27□□□□□ -0.29
USP49-201ENST00000373006 FPGTO14772 594 aa13.27□□□□□ -0.29
USP49-201ENST00000373006 RGS13O14921 159 aa13.27□□□□□ -0.29
USP49-201ENST00000373006 PRKCDQ05655 676 aa13.27□□□□□ -0.29
USP49-201ENST00000373006 SF1Q15637 639 aaKnown RBP13.27□□□□□ -0.29
USP49-201ENST00000373006 FAM20CQ8IXL6 584 aa13.27□□□□□ -0.29
USP49-201ENST00000373006 CLECL1Q8IZS7 167 aa13.27□□□□□ -0.29
USP49-201ENST00000373006 STX19Q8N4C7 294 aa13.27□□□□□ -0.29
USP49-201ENST00000373006 BEND7Q8N7W2 519 aaPredicted RBP13.27□□□□□ -0.29
USP49-201ENST00000373006 OR6K2Q8NGY2 324 aa13.27□□□□□ -0.29
USP49-201ENST00000373006 HRASLS5Q96KN8 279 aa13.27□□□□□ -0.29
USP49-201ENST00000373006 SEPT5Q99719 369 aaPredicted RBP13.27□□□□□ -0.29
USP49-201ENST00000373006 RLIMQ9NVW2 624 aa13.27□□□□□ -0.29
USP49-201ENST00000373006 MAN2B2Q9Y2E5 1009 aa13.27□□□□□ -0.29
USP49-201ENST00000373006 CLCA1A8K7I4 914 aa13.26□□□□□ -0.29
USP49-201ENST00000373006 STK16O75716 305 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms