RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 KCNK6Q9Y257 313 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 VWA7Q9Y334 891 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 PLEKHM1Q9Y4G2 1056 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 ST14Q9Y5Y6 855 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 SCN8AQ9UQD0 1980 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 IGHV1OR21-1A0A087WYE8 117 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 F5H423 210 aaPredicted RBP10.07□□□□□ -0.8
COL5A1-202ENST00000371820 H3BNX3 289 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 K7ENP7 123 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 PDLIM1O00151 329 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 PSMD12O00232 456 aaPredicted RBP10.07□□□□□ -0.8
COL5A1-202ENST00000371820 TXNDC9O14530 226 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 AURKAO14965 403 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 PPM1DO15297 605 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 SNX2O60749 519 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 CRTAMO95727 393 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 CLPTM1O96005 669 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 NPPAP01160 153 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 FAM58BPP0C7Q3 252 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 UBTFL6P0CB48 400 aaPredicted RBP10.07□□□□□ -0.8
COL5A1-202ENST00000371820 HOXB6P17509 224 aaKnown RBP10.07□□□□□ -0.8
COL5A1-202ENST00000371820 LPOP22079 712 aaPredicted RBP10.07□□□□□ -0.8
COL5A1-202ENST00000371820 CD82P27701 267 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 GSTT1P30711 240 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 HALP42357 657 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 CHRNA4P43681 627 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 NR1H2P55055 460 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 PSME3P61289 254 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 FOXM1Q08050 763 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 TMEM115Q12893 351 aaPredicted RBP10.07□□□□□ -0.8
COL5A1-202ENST00000371820 CLN3Q13286 438 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 TAF1AQ15573 450 aaPredicted RBP10.07□□□□□ -0.8
COL5A1-202ENST00000371820 TSTD2Q5T7W7 516 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 VWA5B1Q5TIE3 1220 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 RNF220Q5VTB9 566 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 MRNIPQ6NTE8 343 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 TMEM71Q6P5X7 295 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 IYDQ6PHW0 289 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 INO80CQ6PI98 192 aaPredicted RBP10.07□□□□□ -0.8
COL5A1-202ENST00000371820 CRTC3Q6UUV7 619 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 NAPRTQ6XQN6 538 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 TRAPPC5Q8IUR0 188 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 SFTPA2Q8IWL1 248 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 TRIM48Q8IWZ4 208 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 CCNYL1Q8N7R7 359 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 GPR150Q8NGU9 434 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 RHEBL1Q8TAI7 183 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 KCTD4Q8WVF5 259 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 NXNL1Q96CM4 212 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 L3HYPDHQ96EM0 354 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 DCUN1D1Q96GG9 259 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 ZNF514Q96K75 400 aaPredicted RBP10.07□□□□□ -0.8
COL5A1-202ENST00000371820 OR52B2Q96RD2 323 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 TCF12Q99081 682 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 GORASP1Q9BQQ3 440 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 SEMA4CQ9C0C4 833 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 ZNF696Q9H7X3 374 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 RDH14Q9HBH5 336 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 ZNF358Q9NW07 568 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 SMOXQ9NWM0 555 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 TBC1D29Q9UFV1 150 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 PISDQ9UG56 409 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 CROTQ9UKG9 612 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 ACSL6Q9UKU0 697 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 PRKAB1Q9Y478 270 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 AP4S1Q9Y587 144 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 DNMT3AQ9Y6K1 912 aaPredicted RBP10.07□□□□□ -0.8
COL5A1-202ENST00000371820 TENM4Q6N022 2769 aa10.07□□□□□ -0.8
COL5A1-202ENST00000371820 PRSS51A0A1B0GVH4 220 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 KLHL33A6NCF5 533 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 A6NCN8 305 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 PDZK1P1A8MUH7 402 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 HNRNPRO43390 633 aaKnown RBP10.06□□□□□ -0.8
COL5A1-202ENST00000371820 PDE5AO76074 875 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 VIPP01282 170 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 ZCCHC18P0CG32 403 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 UMPSP11172 480 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 FCGR1AP12314 374 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 ENO3P13929 434 aaPredicted RBP10.06□□□□□ -0.8
COL5A1-202ENST00000371820 ZNF7P17097 686 aaPredicted RBP10.06□□□□□ -0.8
COL5A1-202ENST00000371820 TPH1P17752 444 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 MSH3P20585 1137 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 IL10P22301 178 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 IDSP22304 550 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 MPSTP25325 297 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 CD1CP29017 333 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 SLC7A1P30825 629 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 CSTF2P33240 577 aaKnown RBP eCLIP10.06□□□□□ -0.8
COL5A1-202ENST00000371820 NFKB2Q00653 900 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 LY6DQ14210 128 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 CHRNA6Q15825 494 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 PDCD2Q16342 344 aaPredicted RBP10.06□□□□□ -0.8
COL5A1-202ENST00000371820 ATP13A5Q4VNC0 1218 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 SFT2D3Q587I9 215 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 TCHHL1Q5QJ38 904 aaPredicted RBP10.06□□□□□ -0.8
COL5A1-202ENST00000371820 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.06□□□□□ -0.8
COL5A1-202ENST00000371820 FAM182AQ5T1J6 154 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 DENND5AQ6IQ26 1287 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 UGT2A3Q6UWM9 527 aa10.06□□□□□ -0.8
COL5A1-202ENST00000371820 FAM151BQ6UXP7 276 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms