RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 CXorf40AQ8TE69 158 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 AP2M1Q96CW1 435 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 MTBPQ96DY7 904 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 ELMO2Q96JJ3 720 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 SPATA16Q9BXB7 569 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 C1QTNF1Q9BXJ1 281 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 SMURF2Q9HAU4 748 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 MBNL1Q9NR56 388 aaKnown RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 SNX15Q9NRS6 342 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 INTS10Q9NVR2 710 aaKnown RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 NTMQ9P121 344 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 DLGAP2Q9P1A6 1054 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 TXNDC16Q9P2K2 825 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 SLC17A7Q9P2U7 560 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 AASSQ9UDR5 926 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 RAPGEFL1Q9UHV5 662 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 FZD4Q9ULV1 537 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 VWA7Q9Y334 891 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 VCANP13611 3396 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 TECTAO75443 2155 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TTC28Q96AY4 2481 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 IGLV3-16A0A075B6K0 115 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TBC1D3DA0A087WVF3 549 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TBC1D3IA0A087WXS9 549 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TBC1D3EA0A087X179 549 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TBC1D3KA0A087X1G2 549 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 SH3D21A4FU49 640 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TBC1D3FA6NER0 549 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 PRR23AA6NEV1 266 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TBC1D3LB9A6J9 549 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 SGTAO43765 313 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 AHCYL1O43865 530 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ATG13O75143 517 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 NIPSNAP2O75323 286 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 MTX2O75431 263 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 PAK4O96013 591 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 IGLV3-19P01714 112 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 AMY1AP04745 511 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TBC1D3HP0C7X1 549 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 SLC35E2BP0CK96 405 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 PKMP14618 531 aaKnown RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 NR1D1P20393 614 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 MALP21145 153 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 FDXRP22570 491 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 RPS3P23396 243 aaKnown RBP eCLIP3.47□□□□□ -1.85
MCF2-202ENST00000370573 TYK2P29597 1187 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 RPA3P35244 121 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 RPS9P46781 194 aaKnown RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 POLD2P49005 469 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 PXNP49023 591 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 TTPAP49638 278 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 CCR5P51681 352 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ITGA1P56199 1179 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ROM1Q03395 351 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 DPTQ07507 201 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ZNF284Q2VY69 593 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ZDHHC20Q5W0Z9 365 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TBC1D3GQ6DHY5 549 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TBC1D3CQ6IPX1 549 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ANO7Q6IWH7 933 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 CERS6Q6ZMG9 384 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 CLEC14AQ86T13 490 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 HORMAD1Q86X24 394 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 EGFL6Q8IUX8 553 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TBC1D3Q8IZP1 549 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 SPATA6LQ8N4H0 392 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 SPEM1Q8N4L4 309 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 LSMEM1Q8N8F7 131 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 CDYL2Q8N8U2 506 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 FAM76AQ8TAV0 307 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 IFI44Q8TCB0 444 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TCP10LQ8TDR4 215 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 ANKRD49Q8WVL7 239 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 RLN3Q8WXF3 142 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 CENPTQ96BT3 561 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 FAM136AQ96C01 138 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 MTFMTQ96DP5 389 aaKnown RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 NUS1Q96E22 293 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 LRRC46Q96FV0 321 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 SNX22Q96L94 193 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 GPR78Q96P69 363 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 C1orf43Q9BWL3 253 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TRIM54Q9BYV2 358 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 STMN4Q9H169 189 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 EBF2Q9HAK2 575 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 KCNK9Q9NPC2 374 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 MAGEL2Q9UJ55 1249 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 CRLS1Q9UJA2 301 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 EMCNQ9ULC0 261 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 GRID1Q9ULK0 1009 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 SCML1Q9UN30 329 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 NCKAP1Q9Y2A7 1128 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 CACNA1IQ9P0X4 2223 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 A0A096LPK6 155 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 A0A1W2PPH5 198 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 TMEM120BA0PK00 339 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 FAM47DPA6NHR8 397 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 COPEO14579 308 aa3.47□□□□□ -1.85
MCF2-202ENST00000370573 PRMT5O14744 637 aaPredicted RBP3.47□□□□□ -1.85
MCF2-202ENST00000370573 PIP5K1BO14986 540 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms