RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 HIST1H2AJQ99878 128 aa16.74■□□□□ 0.27
UBE3D-203ENST00000369747 H2AFJQ9BTM1 129 aa16.74■□□□□ 0.27
UBE3D-203ENST00000369747 SLC29A3Q9BZD2 475 aa16.74■□□□□ 0.27
UBE3D-203ENST00000369747 TRIM8Q9BZR9 551 aa16.74■□□□□ 0.27
UBE3D-203ENST00000369747 TMEM168Q9H0V1 697 aa16.74■□□□□ 0.27
UBE3D-203ENST00000369747 ZNF490Q9ULM2 529 aaPredicted RBP16.74■□□□□ 0.27
UBE3D-203ENST00000369747 TNRC6BQ9UPQ9 1833 aaKnown RBP16.74■□□□□ 0.27
UBE3D-203ENST00000369747 CACNA1HO95180 2353 aa16.74■□□□□ 0.27
UBE3D-203ENST00000369747 CROCCQ5TZA2 2017 aa16.74■□□□□ 0.27
UBE3D-203ENST00000369747 TDRD6O60522 2096 aaKnown RBP16.74■□□□□ 0.27
UBE3D-203ENST00000369747 SLC28A1O00337 649 aa16.73■□□□□ 0.27
UBE3D-203ENST00000369747 RSL1D1O76021 490 aaKnown RBP16.73■□□□□ 0.27
UBE3D-203ENST00000369747 SLC2A4P14672 509 aa16.73■□□□□ 0.27
UBE3D-203ENST00000369747 CYP2A7P20853 494 aa16.73■□□□□ 0.27
UBE3D-203ENST00000369747 RPL10P27635 214 aaKnown RBP16.73■□□□□ 0.27
UBE3D-203ENST00000369747 AFF3P51826 1226 aaKnown RBP16.73■□□□□ 0.27
UBE3D-203ENST00000369747 RPL38P63173 70 aaKnown RBP16.73■□□□□ 0.27
UBE3D-203ENST00000369747 HMGCS1Q01581 520 aa16.73■□□□□ 0.27
UBE3D-203ENST00000369747 SMU1Q2TAY7 513 aa16.73■□□□□ 0.27
UBE3D-203ENST00000369747 PTCHD3Q3KNS1 767 aa16.73■□□□□ 0.27
UBE3D-203ENST00000369747 GRAMD1BQ3KR37 738 aa16.73■□□□□ 0.27
UBE3D-203ENST00000369747 IQCHQ86VS3 1027 aa16.73■□□□□ 0.27
UBE3D-203ENST00000369747 DHFR2Q86XF0 187 aa16.73■□□□□ 0.27
UBE3D-203ENST00000369747 SLCO4A1Q96BD0 722 aa16.73■□□□□ 0.27
UBE3D-203ENST00000369747 ZC3H10Q96K80 434 aaKnown RBP16.73■□□□□ 0.27
UBE3D-203ENST00000369747 OR2M4Q96R27 311 aa16.73■□□□□ 0.27
UBE3D-203ENST00000369747 OSGEPL1Q9H4B0 414 aa16.73■□□□□ 0.27
UBE3D-203ENST00000369747 SLAMF8Q9P0V8 285 aa16.73■□□□□ 0.27
UBE3D-203ENST00000369747 DNMT3AQ9Y6K1 912 aaPredicted RBP16.73■□□□□ 0.27
UBE3D-203ENST00000369747 RASGRP1O95267 797 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 CAPNS1P04632 268 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 ATP6V1B2P21281 511 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 AK4P27144 223 aaPredicted RBP16.72■□□□□ 0.27
UBE3D-203ENST00000369747 CNR2P34972 360 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 AP1S2P56377 157 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 SGO1Q5FBB7 561 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 PRAMEF14Q5SWL7 426 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 METRNLQ641Q3 311 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 PARGQ86W56 976 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 TICAM1Q8IUC6 712 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 KIAA2013Q8IYS2 634 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 SLC22A15Q8IZD6 547 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 TMEM102Q8N9M5 508 aaPredicted RBP16.72■□□□□ 0.27
UBE3D-203ENST00000369747 DNAJB14Q8TBM8 379 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 MCOLN3Q8TDD5 553 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 NUDT8Q8WV74 236 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 PYCR2Q96C36 320 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 ACTR8Q9H981 624 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 DTNAQ9Y4J8 743 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 AP4S1Q9Y587 144 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 DGKBQ9Y6T7 804 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 CACNA1EQ15878 2313 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 PI4KAP42356 2102 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 KCNE1BA0A087WTH5 132 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 DYTNA2CJ06 578 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 GALR2O43603 387 aaPredicted RBP16.72■□□□□ 0.27
UBE3D-203ENST00000369747 GSTM1P09488 218 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 JAK1P23458 1154 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 CTBSQ01459 385 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 GSTM4Q03013 218 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 ABRQ12979 859 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 SIM2Q14190 667 aaPredicted RBP16.72■□□□□ 0.27
UBE3D-203ENST00000369747 LPAL2Q16609 132 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 SPATS1Q496A3 300 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 GGTA1PQ4G0N0 100 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 RABL3Q5HYI8 236 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 DPP10Q8N608 796 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 GATA6Q92908 595 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 GLMNQ92990 594 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 ZUFSPQ96AP4 578 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 TIMM29Q9BSF4 260 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 PILRBQ9UKJ0 227 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 PCDHGA2Q9Y5H1 932 aa16.72■□□□□ 0.27
UBE3D-203ENST00000369747 PABPN1LA6NDY0 278 aaKnown RBP16.71■□□□□ 0.27
UBE3D-203ENST00000369747 PRR19A6NJB7 356 aa16.71■□□□□ 0.27
UBE3D-203ENST00000369747 H3BM21 787 aa16.71■□□□□ 0.27
UBE3D-203ENST00000369747 VILLO15195 856 aa16.71■□□□□ 0.27
UBE3D-203ENST00000369747 SLC7A1P30825 629 aa16.71■□□□□ 0.27
UBE3D-203ENST00000369747 NXPH1P58417 271 aa16.71■□□□□ 0.27
UBE3D-203ENST00000369747 MRPS35P82673 323 aaKnown RBP16.71■□□□□ 0.27
UBE3D-203ENST00000369747 DMPKQ09013 629 aa16.71■□□□□ 0.27
UBE3D-203ENST00000369747 CPSF6Q16630 551 aaKnown RBP eCLIP16.71■□□□□ 0.27
UBE3D-203ENST00000369747 SLC2A7Q6PXP3 512 aa16.71■□□□□ 0.27
UBE3D-203ENST00000369747 PRR23BQ6ZRT6 265 aa16.71■□□□□ 0.27
UBE3D-203ENST00000369747 DCP2Q8IU60 420 aaKnown RBP16.71■□□□□ 0.27
UBE3D-203ENST00000369747 PIGKQ92643 395 aa16.71■□□□□ 0.27
UBE3D-203ENST00000369747 MTFMTQ96DP5 389 aaKnown RBP16.71■□□□□ 0.27
UBE3D-203ENST00000369747 OR52A5Q9H2C5 316 aa16.71■□□□□ 0.27
UBE3D-203ENST00000369747 LRTM1Q9HBL6 345 aa16.71■□□□□ 0.27
UBE3D-203ENST00000369747 INTS7Q9NVH2 962 aaKnown RBP16.71■□□□□ 0.27
UBE3D-203ENST00000369747 EIF3LQ9Y262 564 aaKnown RBP16.71■□□□□ 0.27
UBE3D-203ENST00000369747 WDR37Q9Y2I8 494 aa16.71■□□□□ 0.27
UBE3D-203ENST00000369747 A0A1B0GVT2 93 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 ARHGEF33A8MVX0 844 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 PSIP1O75475 530 aaKnown RBP16.7■□□□□ 0.26
UBE3D-203ENST00000369747 NPPAP01160 153 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 PDYNP01213 254 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 KRT6AP02538 564 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 KRT6BP04259 564 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 CELA2BP08218 269 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms