RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 FASTKD3Q14CZ7 662 aaKnown RBP6.67□□□□□ -1.34
CSDE1-204ENST00000369530 TAF12Q16514 161 aa6.67□□□□□ -1.34
CSDE1-204ENST00000369530 GRTP1Q5TC63 336 aa6.67□□□□□ -1.34
CSDE1-204ENST00000369530 TIGD3Q6B0B8 471 aa6.67□□□□□ -1.34
CSDE1-204ENST00000369530 CYP20A1Q6UW02 462 aa6.67□□□□□ -1.34
CSDE1-204ENST00000369530 KCTD8Q6ZWB6 473 aa6.67□□□□□ -1.34
CSDE1-204ENST00000369530 SPRED1Q7Z699 444 aa6.67□□□□□ -1.34
CSDE1-204ENST00000369530 PLCZ1Q86YW0 608 aa6.67□□□□□ -1.34
CSDE1-204ENST00000369530 PGAM4Q8N0Y7 254 aa6.67□□□□□ -1.34
CSDE1-204ENST00000369530 PCDH20Q8N6Y1 951 aaKnown RBP6.67□□□□□ -1.34
CSDE1-204ENST00000369530 FLVCR1-AS1Q8TAF5 88 aa6.67□□□□□ -1.34
CSDE1-204ENST00000369530 PDCD6IPQ8WUM4 868 aaKnown RBP6.67□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF778Q96MU6 729 aa6.67□□□□□ -1.34
CSDE1-204ENST00000369530 RBM14Q96PK6 669 aaKnown RBP6.67□□□□□ -1.34
CSDE1-204ENST00000369530 PAQR5Q9NXK6 330 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-204ENST00000369530 TXNDC16Q9P2K2 825 aa6.67□□□□□ -1.34
CSDE1-204ENST00000369530 FARP1Q9Y4F1 1045 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-204ENST00000369530 NUMA1Q14980 2115 aa6.67□□□□□ -1.34
CSDE1-204ENST00000369530 APOC4-APOC2K7ER74 178 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF780AO75290 641 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 ADH1BP00325 375 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 APOC2P02655 101 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 RPL22P35268 128 aaKnown RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 NKX2-5P52952 324 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 BST1Q10588 318 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 ESRP1Q6NXG1 681 aaKnown RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 SLC36A4Q6YBV0 504 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 FRMD7Q6ZUT3 714 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 CREB3L2Q70SY1 520 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 SNX32Q86XE0 403 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 SYT12Q8IV01 421 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 GALNT12Q8IXK2 581 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 GPALPP1Q8IXQ4 340 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF680Q8NEM1 530 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 MCOLN3Q8TDD5 553 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 RNF139Q8WU17 664 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 NCLNQ969V3 563 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 HMCESQ96FZ2 354 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 RNF157Q96PX1 679 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 MTG2Q9H4K7 406 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 SPATA6Q9NWH7 488 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 KLHL8Q9P2G9 620 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 DEC1Q9P2X7 70 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 OR12D3Q9UGF7 316 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 BAG5Q9UL15 447 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 TCRBV21S2A2A0A5A6 115 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 CCDC78A2IDD5 438 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 J3KR12 359 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 IFNA16P05015 189 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 KRT8P05787 483 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 INHBAP08476 426 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 HOXD4P09016 255 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 COX4I1P13073 169 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 MAP4P27816 1152 aaKnown RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 SLC7A1P30825 629 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 AQP5P55064 265 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 SESN2P58004 480 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 CST6Q15828 149 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF765Q7L2R6 523 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 PID1Q7Z2X4 250 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 LINC00523Q86TU6 105 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 PPIL6Q8IXY8 311 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 CFAP52Q8N1V2 620 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 PPM1NQ8N819 430 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 DNAAF3Q8N9W5 541 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 MUL1Q969V5 352 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 SLCO4A1Q96BD0 722 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 COPS7BQ9H9Q2 264 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 POLR1BQ9H9Y6 1135 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 PCDH9Q9HC56 1237 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF639Q9UID6 485 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 TRAV6A0A075B6T7 132 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 C12orf71A8MTZ7 269 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 KCNK1O00180 336 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 EEF2KO00418 725 aaKnown RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 DFNA5O60443 496 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 BCAS1O75363 584 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 YES1P07947 543 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 HMBSP08397 361 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 CD27P26842 260 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 TPI1P60174 286 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 RHDQ02161 417 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 PTSQ03393 145 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 DNASE1L3Q13609 305 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 FZD2Q14332 565 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 TYSND1Q2T9J0 566 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF648Q5T619 568 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-204ENST00000369530 ZBTB37Q5TC79 503 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 HMBOX1Q6NT76 420 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 TMEM65Q6PI78 240 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 CRLF3Q8IUI8 442 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 TCTE3Q8IZS6 198 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 FAM47BQ8NA70 645 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 FBXO36Q8NEA4 188 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 WDR48Q8TAF3 677 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 SLC35B2Q8TB61 432 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 ZFP90Q8TF47 636 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 CYB5D2Q8WUJ1 264 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 SGK3Q96BR1 496 aa6.66□□□□□ -1.34
CSDE1-204ENST00000369530 ASB9Q96DX5 294 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms