RNA–Protein interactions for RNA: ENST00000369452.8

SHOC2-202, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOC2, Length 3,943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-202ENST00000369452 LHX9Q9NQ69 397 aa12.59□□□□□ -0.39
SHOC2-202ENST00000369452 SOX1O00570 391 aaPredicted RBP12.59□□□□□ -0.39
SHOC2-202ENST00000369452 AP1G1O43747 822 aa12.59□□□□□ -0.39
SHOC2-202ENST00000369452 NDUFV2P19404 249 aa12.59□□□□□ -0.39
SHOC2-202ENST00000369452 MAP4P27816 1152 aaKnown RBP12.59□□□□□ -0.39
SHOC2-202ENST00000369452 PCDH1Q08174 1060 aa12.59□□□□□ -0.39
SHOC2-202ENST00000369452 PWP1Q13610 501 aa12.59□□□□□ -0.39
SHOC2-202ENST00000369452 ZNF548Q8NEK5 533 aaPredicted RBP12.59□□□□□ -0.39
SHOC2-202ENST00000369452 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.59□□□□□ -0.39
SHOC2-202ENST00000369452 BIRC7Q96CA5 298 aa12.59□□□□□ -0.39
SHOC2-202ENST00000369452 PDXPQ96GD0 296 aa12.59□□□□□ -0.39
SHOC2-202ENST00000369452 OR52E6Q96RD3 313 aa12.59□□□□□ -0.39
SHOC2-202ENST00000369452 NTN4Q9HB63 628 aa12.59□□□□□ -0.39
SHOC2-202ENST00000369452 GPATCH2Q9NW75 528 aa12.59□□□□□ -0.39
SHOC2-202ENST00000369452 VPS4AQ9UN37 437 aa12.59□□□□□ -0.39
SHOC2-202ENST00000369452 SNX13Q9Y5W8 968 aa12.59□□□□□ -0.39
SHOC2-202ENST00000369452 PIAS3Q9Y6X2 628 aa12.59□□□□□ -0.39
SHOC2-202ENST00000369452 NPIPB8E9PQR5 432 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 UPK1AO00322 258 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 LIN7AO14910 233 aaPredicted RBP12.58□□□□□ -0.39
SHOC2-202ENST00000369452 ZCCHC18P0CG32 403 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 ERGP11308 486 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 CDH1P12830 882 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 NELFEP18615 380 aaKnown RBP12.58□□□□□ -0.39
SHOC2-202ENST00000369452 PEBP1P30086 187 aaKnown RBP12.58□□□□□ -0.39
SHOC2-202ENST00000369452 PNLIPRP1P54315 467 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 HKDC1Q2TB90 917 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 GRAMD1BQ3KR37 738 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 LIPJQ5W064 366 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 PLCD3Q8N3E9 789 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 TCAIMQ8N3R3 496 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 OXR1Q8N573 874 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 RPLP0P6Q8NHW5 317 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 TSPEARQ8WU66 669 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 CMTM7Q96FZ5 175 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 DPY30Q9C005 99 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 PRDM8Q9NQV8 689 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 SUFUQ9UMX1 484 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 ASF1AQ9Y294 204 aa12.58□□□□□ -0.39
SHOC2-202ENST00000369452 C17orf113A0A1B0GUU1 675 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 DPPA5A6NC42 116 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 GABRR3A8MPY1 467 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 LCMT2O60294 686 aaKnown RBP12.58□□□□□ -0.4
SHOC2-202ENST00000369452 PCNAP12004 261 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 MYCLP1P12525 358 aaPredicted RBP12.58□□□□□ -0.4
SHOC2-202ENST00000369452 CLCNKAP51800 687 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 PPP1R8Q12972 351 aaKnown RBP12.58□□□□□ -0.4
SHOC2-202ENST00000369452 SLBPQ14493 270 aaKnown RBP eCLIP12.58□□□□□ -0.4
SHOC2-202ENST00000369452 AGERQ15109 404 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 PGS1Q32NB8 556 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 RUNDC3AQ59EK9 446 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 FAM129CQ86XR2 697 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 CHTF18Q8WVB6 975 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 DPH2Q9BQC3 489 aaPredicted RBP12.58□□□□□ -0.4
SHOC2-202ENST00000369452 SOX17Q9H6I2 414 aaPredicted RBP12.58□□□□□ -0.4
SHOC2-202ENST00000369452 RAD18Q9NS91 495 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 CCM2LQ9NUG4 571 aaPredicted RBP12.58□□□□□ -0.4
SHOC2-202ENST00000369452 ACTR3BQ9P1U1 418 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 SNX6Q9UNH7 406 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 SERTM1A2A2V5 107 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 PIPSLA2A3N6 862 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 RNGTTO60942 597 aaKnown RBP12.58□□□□□ -0.4
SHOC2-202ENST00000369452 NUDT7P0C024 238 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 FUT4P22083 530 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 SLC7A1P30825 629 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 NTSR1P30989 418 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 TNFRSF4P43489 277 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 IST1P53990 364 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 BLMHQ13867 455 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 CHRDL2Q6WN34 429 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 AMZ2Q86W34 360 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 FBXO15Q8NCQ5 510 aaPredicted RBP12.58□□□□□ -0.4
SHOC2-202ENST00000369452 TFGQ92734 400 aaPredicted RBP12.58□□□□□ -0.4
SHOC2-202ENST00000369452 RSRC1Q96IZ7 334 aaKnown RBP12.58□□□□□ -0.4
SHOC2-202ENST00000369452 KCTD14Q9BQ13 255 aaPredicted RBP12.58□□□□□ -0.4
SHOC2-202ENST00000369452 SLC17A9Q9BYT1 436 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 REXO4Q9GZR2 422 aaKnown RBP12.58□□□□□ -0.4
SHOC2-202ENST00000369452 KAT8Q9H7Z6 458 aaKnown RBP12.58□□□□□ -0.4
SHOC2-202ENST00000369452 CD207Q9UJ71 328 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 AURKCQ9UQB9 309 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 KLHL20Q9Y2M5 609 aa12.58□□□□□ -0.4
SHOC2-202ENST00000369452 TMEM229AB2RXF0 380 aa12.57□□□□□ -0.4
SHOC2-202ENST00000369452 RTCAO00442 366 aaKnown RBP12.57□□□□□ -0.4
SHOC2-202ENST00000369452 VEGFDO43915 354 aa12.57□□□□□ -0.4
SHOC2-202ENST00000369452 KRT6AP02538 564 aa12.57□□□□□ -0.4
SHOC2-202ENST00000369452 CATP04040 527 aaKnown RBP12.57□□□□□ -0.4
SHOC2-202ENST00000369452 KRT6BP04259 564 aa12.57□□□□□ -0.4
SHOC2-202ENST00000369452 GNAO1P09471 354 aa12.57□□□□□ -0.4
SHOC2-202ENST00000369452 HOXB2P14652 356 aa12.57□□□□□ -0.4
SHOC2-202ENST00000369452 KRT6CP48668 564 aa12.57□□□□□ -0.4
SHOC2-202ENST00000369452 FOLH1Q04609 750 aa12.57□□□□□ -0.4
SHOC2-202ENST00000369452 GAB1Q13480 694 aa12.57□□□□□ -0.4
SHOC2-202ENST00000369452 CAPRIN2Q6IMN6 1127 aaKnown RBP12.57□□□□□ -0.4
SHOC2-202ENST00000369452 ADGRF3Q8IZF5 1079 aa12.57□□□□□ -0.4
SHOC2-202ENST00000369452 FLCNQ8NFG4 579 aa12.57□□□□□ -0.4
SHOC2-202ENST00000369452 PNPT1Q8TCS8 783 aaKnown RBP12.57□□□□□ -0.4
SHOC2-202ENST00000369452 HM13Q8TCT9 377 aa12.57□□□□□ -0.4
SHOC2-202ENST00000369452 BMFQ96LC9 184 aa12.57□□□□□ -0.4
SHOC2-202ENST00000369452 CENPKQ9BS16 269 aa12.57□□□□□ -0.4
SHOC2-202ENST00000369452 BTBD1Q9H0C5 482 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms