RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 ATP4BP51164 291 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 TAS2R38P59533 333 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 ERVPABLB-1P60509 514 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 KCNC4Q03721 635 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 ZXDCQ2QGD7 858 aaPredicted RBP10.33□□□□□ -0.76
TPM3-212ENST00000368533 OTUD3Q5T2D3 398 aaPredicted RBP10.33□□□□□ -0.76
TPM3-212ENST00000368533 UBE2UQ5VVX9 321 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 IL27RAQ6UWB1 636 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 KIAA1324Q6UXG2 1013 aaKnown RBP10.33□□□□□ -0.76
TPM3-212ENST00000368533 GPRIN3Q6ZVF9 776 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 KCTD8Q6ZWB6 473 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 TRMT11Q7Z4G4 463 aaKnown RBP10.33□□□□□ -0.76
TPM3-212ENST00000368533 GOLGA7Q7Z5G4 137 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 KIAA2013Q8IYS2 634 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 DEPDC4Q8N2C3 294 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 PSD4Q8NDX1 1056 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 OR56A4Q8NGH8 313 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 MAGEE2Q8TD90 523 aaPredicted RBP10.33□□□□□ -0.76
TPM3-212ENST00000368533 MED8Q96G25 268 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 CTRCQ99895 268 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 ALG2Q9H553 416 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 SDR39U1Q9NRG7 319 aaPredicted RBP10.33□□□□□ -0.76
TPM3-212ENST00000368533 SMOXQ9NWM0 555 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 KLHL3Q9UH77 587 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 USP22Q9UPT9 525 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 PDE10AQ9Y233 779 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 AREL1O15033 823 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 RAD51BO15315 384 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 CAPN1P07384 714 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 POLR2IP36954 125 aaKnown RBP10.33□□□□□ -0.76
TPM3-212ENST00000368533 HPCAL1P37235 193 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 GSK3BP49841 420 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 RAD23AP54725 363 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 PRKG2Q13237 762 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 NFE2L1Q14494 772 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 CPSF6Q16630 551 aaKnown RBP eCLIP10.33□□□□□ -0.765e-7■□□□□ 10.7
TPM3-212ENST00000368533 PAGE3Q5JUK9 113 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 PIP5KL1Q5T9C9 394 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 BLOC1S3Q6QNY0 202 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 HACD2Q6Y1H2 254 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 Q6ZS52 159 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 HEATR4Q86WZ0 1026 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 IL17RCQ8NAC3 791 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 OR4F6Q8NGB9 312 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 RPLP0P6Q8NHW5 317 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 PPP1R16AQ96I34 528 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 PPM1MQ96MI6 270 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 RNF145Q96MT1 663 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 ZSCAN5AQ9BUG6 496 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 CCM2LQ9NUG4 571 aaPredicted RBP10.33□□□□□ -0.76
TPM3-212ENST00000368533 KCTD5Q9NXV2 234 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 CNOT11Q9UKZ1 510 aaKnown RBP10.33□□□□□ -0.76
TPM3-212ENST00000368533 TBC1D3DA0A087WVF3 549 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 TBC1D3IA0A087WXS9 549 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 TBC1D3EA0A087X179 549 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 TBC1D3KA0A087X1G2 549 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 TBC1D3FA6NER0 549 aaPredicted RBP10.32□□□□□ -0.76
TPM3-212ENST00000368533 AGAP14A8MT82 685 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 TBC1D3LB9A6J9 549 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 TBC1D3HP0C7X1 549 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 RPS3P23396 243 aaKnown RBP eCLIP10.32□□□□□ -0.76
TPM3-212ENST00000368533 AOAHP28039 575 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 GGT5P36269 586 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 MTHFRP42898 656 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 KIR2DL1P43626 348 aaPredicted RBP10.32□□□□□ -0.76
TPM3-212ENST00000368533 POLR2JP52435 117 aaKnown RBP10.32□□□□□ -0.76
TPM3-212ENST00000368533 GTF2H2Q13888 395 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 NR6A1Q15406 480 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 TTLL9Q3SXZ7 439 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 ATP6AP1LQ52LC2 224 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 TBC1D3GQ6DHY5 549 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 TBC1D3CQ6IPX1 549 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 GTF2H2CQ6P1K8 395 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 ADAMTSL2Q86TH1 951 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 TBC1D3Q8IZP1 549 aaPredicted RBP10.32□□□□□ -0.76
TPM3-212ENST00000368533 PARP8Q8N3A8 854 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 TRAM1L1Q8N609 369 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 RIC8BQ9NVN3 520 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 CD207Q9UJ71 328 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 PCM1Q15154 2024 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 A0A1W2PP18 115 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 FXYD1O00168 92 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 CLOCKO15516 846 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 ABCB7O75027 752 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 VPS4BO75351 444 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 BCL10O95999 233 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 CHRNB1P11230 501 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 PCNAP12004 261 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 ZNF8P17098 575 aaPredicted RBP10.32□□□□□ -0.76
TPM3-212ENST00000368533 CLK3P49761 638 aaKnown RBP10.32□□□□□ -0.76
TPM3-212ENST00000368533 HMGCS1Q01581 520 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 BNIP2Q12982 314 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 OXA1LQ15070 435 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 AGBL4Q5VU57 503 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 RD3Q7Z3Z2 195 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 PHYKPLQ8IUZ5 450 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 PGBD3Q8N328 593 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 MINDY1Q8N5J2 469 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 SGCDQ92629 289 aa10.32□□□□□ -0.76
TPM3-212ENST00000368533 TMEM159Q96B96 161 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms