RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 UNC50Q53HI1 259 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 XKR6Q5GH73 641 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 GTF2H2CQ6P1K8 395 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 FBXO42Q6P3S6 717 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 NXPE4Q6UWF7 544 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 SLC22A9Q8IVM8 553 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 MCATQ8IVS2 390 aaKnown RBP13.33□□□□□ -0.28
TPM3-211ENST00000368531 C10orf107Q8IVU9 208 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 DNAJC22Q8N4W6 341 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 CCNYL1Q8N7R7 359 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 BMPERQ8N8U9 685 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 USP7Q93009 1102 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 PMEPA1Q969W9 287 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 ATP6V1E2Q96A05 226 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 SELENOSQ9BQE4 189 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 MECRQ9BV79 373 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 SPNS1Q9H2V7 528 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 ACBD3Q9H3P7 528 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 POLR1BQ9H9Y6 1135 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 PRM3Q9NNZ6 103 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 MLXIPLQ9NP71 852 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 SEMA4BQ9NPR2 832 aaPredicted RBP13.33□□□□□ -0.28
TPM3-211ENST00000368531 SIDT1Q9NXL6 827 aaKnown RBP13.33□□□□□ -0.28
TPM3-211ENST00000368531 COPG2Q9UBF2 871 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 MID2Q9UJV3 735 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 RARRES3Q9UL19 164 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 PLCL2Q9UPR0 1127 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 ACTL7BQ9Y614 415 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 LOC105369274A0A096LPK9 316 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 LOC102723532A0A0G2JNH3 316 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 B4E171 279 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 E2F3O00716 465 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 POLR1CO15160 346 aaPredicted RBP13.32□□□□□ -0.28
TPM3-211ENST00000368531 OR1F1O43749 312 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 PRAMEF4O60810 478 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 KATNA1O75449 491 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 CTSBP07858 339 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 C1GALT1C1LP0DN25 315 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 EPORP19235 508 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 HRH2P25021 359 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 RBMS1P29558 406 aaKnown RBP13.32□□□□□ -0.28
TPM3-211ENST00000368531 ALDH3A1P30838 453 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 TSPAN7P41732 249 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 VSX2P58304 361 aaPredicted RBP13.32□□□□□ -0.28
TPM3-211ENST00000368531 HERVK_113P63132 956 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 IRF8Q02556 426 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 CHIT1Q13231 466 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 CAMK2BQ13554 666 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 MPP2Q14168 576 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 PCLAFQ15004 111 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 RBBP5Q15291 538 aaKnown RBP13.32□□□□□ -0.28
TPM3-211ENST00000368531 RBBP7Q16576 425 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 TTMPQ5BVD1 217 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 ZC3H12BQ5HYM0 836 aaKnown RBP13.32□□□□□ -0.28
TPM3-211ENST00000368531 PRAMEF9Q5VWM5 478 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 FRMPD2BQ6IN97 320 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 SLCO4C1Q6ZQN7 724 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 MYLK4Q86YV6 388 aaPredicted RBP13.32□□□□□ -0.28
TPM3-211ENST00000368531 OR4N4Q8N0Y3 316 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 ZNF740Q8NDX6 193 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 ABHD11Q8NFV4 315 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 RDH11Q8TC12 318 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 MGARPQ8TDB4 240 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 CCDC126Q96EE4 140 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 PRR11Q96HE9 360 aaPredicted RBP13.32□□□□□ -0.28
TPM3-211ENST00000368531 ATP6V1G3Q96LB4 118 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 TMEM237Q96Q45 408 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 TAAR9Q96RI9 348 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 SH3GL2Q99962 352 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 PAIP2Q9BPZ3 127 aaKnown RBP13.32□□□□□ -0.28
TPM3-211ENST00000368531 ZFYVE21Q9BQ24 234 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 ERVK-6Q9BXR3 956 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 CAPS2Q9BXY5 557 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 SPRTNQ9H040 489 aaPredicted RBP13.32□□□□□ -0.28
TPM3-211ENST00000368531 NOL11Q9H8H0 719 aaKnown RBP13.32□□□□□ -0.28
TPM3-211ENST00000368531 IPPKQ9H8X2 491 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 FANCEQ9HB96 536 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 SSU72Q9NP77 194 aaKnown RBP13.32□□□□□ -0.28
TPM3-211ENST00000368531 FBXO8Q9NRD0 319 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 STARD5Q9NSY2 213 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 GPRC5BQ9NZH0 403 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 ANKMY1Q9P2S6 941 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 PCTPQ9UKL6 214 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 NEUROG3Q9Y4Z2 214 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 KNTC1P50748 2209 aa13.32□□□□□ -0.28
TPM3-211ENST00000368531 TMEM120BA0PK00 339 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 PRPF4O43172 522 aaKnown RBP eCLIP13.31□□□□□ -0.28
TPM3-211ENST00000368531 LCMT2O60294 686 aaKnown RBP13.31□□□□□ -0.28
TPM3-211ENST00000368531 SERPIND1P05546 499 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 RPS17P08708 135 aaKnown RBP13.31□□□□□ -0.28
TPM3-211ENST00000368531 EZRP15311 586 aaKnown RBP13.31□□□□□ -0.28
TPM3-211ENST00000368531 IMPDH1P20839 514 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 HPDP32754 393 aaPredicted RBP13.31□□□□□ -0.28
TPM3-211ENST00000368531 GRK3P35626 688 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 GABRA4P48169 554 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 CCNG1P51959 295 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 NAGLUP54802 743 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 NFKB2Q00653 900 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 DOC2AQ14183 400 aa13.31□□□□□ -0.28
TPM3-211ENST00000368531 SLBPQ14493 270 aaKnown RBP eCLIP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms